Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02625 ATGGGTGAAGAGCAAAAGAAACTGGATGTCCTTTCCAATGATGTATTCGTCAAGGCTTTGATTAGCAGTGGGAGAACATGCATTTTGGTCTCTGAAGAAGATGAAGAAGCAACAATTGTGGAGCCTTCTAAGCGTGGAAAGTTGTTAACCTATCTATATAGCCTAGTAGTGTACTGTGTTGTTTTTGACCCGTTGGATGGTTCATCTAACATTGATTGTGGTGTTTCCATTGGCACAATATTTGGGATTTATTTGATGAAAGATGCCCATGAACCAACCGTAGACGATGTTTTGCTACCTGGGAAGAAGATGGTGGCAGCTGGTTATTGTATGTATGGAAGCTCTTGCACGTTTGTGTTAAGCACAGGAAGAGGTGTTAATGGTTTCACCCTTGATCCATCTCTTGGGGAGTTCATTCTAACTCACCCAGATATCAAGGTATAG 444 0.4167 MGEEQKKLDVLSNDVFVKALISSGRTCILVSEEDEEATIVEPSKRGKLLTYLYSLVVYCVVFDPLDGSSNIDCGVSIGTIFGIYLMKDAHEPTVDDVLLPGKKMVAAGYCMYGSSCTFVLSTGRGVNGFTLDPSLGEFILTHPDIKV 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02625 147 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 2 147 IPR000146 GO:0005975|GO:0016791
Pste4g02625 147 Gene3D - 1 145 - -
Pste4g02625 147 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 2 143 IPR033391 -
Pste4g02625 147 PRINTS Fructose-1,6-bisphosphatase signature 128 147 IPR028343 GO:0042132
Pste4g02625 147 PRINTS Fructose-1,6-bisphosphatase signature 97 120 IPR028343 GO:0042132
Pste4g02625 147 PRINTS Fructose-1,6-bisphosphatase signature 7 33 IPR028343 GO:0042132
Pste4g02625 147 SUPERFAMILY Carbohydrate phosphatase 2 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02625 Pste-Chr4 18559694 18560889 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pste4g02625 FBPase 1.2e-54 CL0171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01025 9 6979856 6983476 Pste4g02625 4 18559694 18560889 PCT