Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02620 TCCGTGCCACTTTTCTTATTACCTGTTACCATAACAAATGAACAGAGTCAGGTGGATTTACCGGATGAGAACAGATAAACAATACAAAAAATAATGAAGATTCCACAGCTAAAAAAGAGAAGAAAAGGAAACACGTAAAAAGTTGTTAAAAAAATAAAATAAAAAGGGAAATATTTAATTATTCATATAACAATTATTATTCCTCTTTTTATTATAGAAAAAATGGTCAAAAATAATAATATAAAAAATAAAAATAAAATCTCCCAACTCCAACTCCAACTCCAACTCCAACGCAGAGAGAGAGGTTTGGTATGTATATAGAGACATAAAATAAAAAGAGGCATAAAATTTTGAAAGAATTCACCACCCTTTTTGCTCTGTTTATATTTTTAATTTTTCTCTTAGTCTAAGCTGCTGTAATTGCTGGGGAGCTGTTTTGGAAAAGAGGGAGAGGGAGAGAGAGAGAGAGGGAAAAGAGACTATGCTTGGGGACACAGCGGTGTTGGAAGGTGGCGATGCGGTGACGCATGAGGCGGCGACGACAACCGGGGGAGGGGGAGTGGGATCAAATTCGGGGGACGATGAAAGGGGAAGAATCGAAGAGAGTGAGCGTAGCTTCGGAGGTAACCGGTGGCCACGACAAGAGACTTTGGCCTTGTTAAGGATACGGTCGGATATGGACGTGGCGTTTCGAGATGCAAGTGTTAAGGGTCCCTTGTGGGAAGAAGTATCCAGGAAAATGGCAGAGCTTGGTTACCACAGAAGTTCCAAGAAGTGCAAAGAAAAATTCGAGAACGTGTACAAGTACCATAAGAGAACCAAAGAAGGTCGAAGTGGGAAACAAGATGGCAAAACATATCGTTTCTTTGATCAACTAGAAGCCCTTGACAACCACACTCCATCACCCCATTCCCCCAACCCATCACCAAAACCACCGCAATCAGCACCACCAAGAGTAGCAGCAACAACAATTGCATCCGTGTCACTACCAATTGCAGCAGCAACACCAACAACTGCATCATCAGTGTCACTGGCAATTCCAACTACAACAACAACAGTGCCAATGCAGCCGATACTATCCAACACCACTCTCACTAGTACTGTCCCCCATATCACTGTTCCATCAACAACAGCACTCCCTGTAATCCCACCCCAACCCATTCTCACCACCACATCAATAAACCTCACCATCCCTTCTTTCCCTCCATCAAACCCTACAAATTTTCCACCACCGTCAAACCCTACCACCAACACCACCCCATTACCCTCTTTCCCCACCAACACCTTCTCCAACTCCAGCTCCTCCTCCACTTCTTCCGATGAAACATTGGAAGGTAGACGCAAGAGAAAGCGCAAATGGAAAGACTTCTTCGAGAGACTAATGAAGGAAGTGATCGAGAAGCAAGAGGAACTACAAAAGAAGTTCCTGGAAGCGATAGAGAAACGCGAACACGACAGAATAGCAAGAGAGGAAGAATGGAGGGTACAAGAGATGCAAAGAATCGATAGAGAAAGAGAAATCTTAGCGCAGGAGAGATCCATAGCCGCAGCCAAAGATGCAGCCGTAATGTCATTCTTACAAAAAATAGCGGAACAACAAAACCTCGATCAAGGATTGACCAACATCAACCTCGTGCCACCACAACAACAACAGCAACAACAAACACCGTTGCCACAAGTGACACCAGCTAGTGCAACAGCACCAGTAGTGCAGCAACCACCAGCCGTGGTCGTGACGCAGCCTGTGGCACTGCCAACGGTGTCACAAGTGACCAATATGGAGATAGTGAAAGTTGATAACAAAAATAATAGCGGGGAGAAATTCATGGCATCGAGTTCTTCGAGGTGGCCAAAAGTGGAGGTTCAGGCGTTGATAAAGCTTCGAACGAACCTGGATGCAAAGTACCAAGAGAATGGACCAAAGGGTCCTCTTTGGGAGGAGATATCAGGCTCGATGAGGAAGCTGGGGTACAACCGAAACGCCAAAAGGTGCAAAGAGAAATGGGAGAACATCAACAAGTACTTTAAGAAGGTAAAAGAAAGCAACAAGCGGAGAACGGAGGATTCAAAAACGTGCCCTTATTTCCACCAGCTGGACGCGCTGTACCGAGAGAAGAACAAGGGGGAGAGCACAGCAGTAAAGCCGGAGAGCACGCTGGCGCCGCTGATGGTGCGGCCGGAGCAGCAATGGCCACCTCAGCAGGAAACGATGAGAGATAGGGATATGACAATGGAGGACGACGAATACGAAGAAGAGAGGGAGGGAGAGGAAGAAGAAGAAGATGAAGAGGAGGAGGAGGTGGGAACTACGAGATAGTGGCAAACAAGCAAAGTGGTGCATCACTTGGGGCTTCAACGGAGTAGTGTGATGAAAGAAGGAGGTGGTGTGCAGGGGTTGTCGGAGCTGGCCATGCTCCTGGAGGAAGGATTTGAATATTCACCATAGGTGAACTCACACATGGCATCGCTATCCATCTTTGCAAGATGAGGTTTGCTTGCTACTTTCTTTTACCATATAGTCACTAAGATTATATGTTTTTTCTTTTATAAAATTTGTTTATTTTTTTTAAATAATAAATAAGTATCATCAGAGAGGAATTTAAGATAGAGACCAATAAAGATGAGACGGACCTTAATTAAGGTTGTATTTTTTCGTTTCTCTTCATCTTGTTTCTTACCTTGCTTCCTGCTTCTGTAAATGAGAGGCCATTATTTCCAGTTTTGTCCTTTTCTTTATGTTTTCAG 2745 0.443 MLGDTAVLEGGDAVTHEAATTTGGGGVGSNSGDDERGRIEESERSFGGNRWPRQETLALLRIRSDMDVAFRDASVKGPLWEEVSRKMAELGYHRSSKKCKEKFENVYKYHKRTKEGRSGKQDGKTYRFFDQLEALDNHTPSPHSPNPSPKPPQSAPPRVAATTIASVSLPIAAATPTTASSVSLAIPTTTTTVPMQPILSNTTLTSTVPHITVPSTTALPVIPPQPILTTTSINLTIPSFPPSNPTNFPPPSNPTTNTTPLPSFPTNTFSNSSSSSTSSDETLEGRRKRKRKWKDFFERLMKEVIEKQEELQKKFLEAIEKREHDRIAREEEWRVQEMQRIDREREILAQERSIAAAKDAAVMSFLQKIAEQQNLDQGLTNINLVPPQQQQQQQTPLPQVTPASATAPVVQQPPAVVVTQPVALPTVSQVTNMEIVKVDNKNNSGEKFMASSSSRWPKVEVQALIKLRTNLDAKYQENGPKGPLWEEISGSMRKLGYNRNAKRCKEKWENINKYFKKVKESNKRRTEDSKTCPYFHQLDALYREKNKGESTAVKPESTLAPLMVRPEQQWPPQQETMRDRDMTMEDDEYEEEREGEEEEEDEEEEEVGTTR 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02620 611 MobiDBLite consensus disorder prediction 142 156 - -
Pste4g02620 611 MobiDBLite consensus disorder prediction 242 258 - -
Pste4g02620 611 MobiDBLite consensus disorder prediction 1 52 - -
Pste4g02620 611 CDD GT1 454 519 - -
Pste4g02620 611 ProSiteProfiles Myb-like domain profile. 49 107 IPR001005 -
Pste4g02620 611 MobiDBLite consensus disorder prediction 238 289 - -
Pste4g02620 611 FunFam Trihelix transcription factor GT-2 51 112 - -
Pste4g02620 611 SMART sant 47 109 IPR001005 -
Pste4g02620 611 SMART sant 452 514 IPR001005 -
Pste4g02620 611 MobiDBLite consensus disorder prediction 135 159 - -
Pste4g02620 611 MobiDBLite consensus disorder prediction 546 611 - -
Pste4g02620 611 CDD GT1 49 114 - -
Pste4g02620 611 MobiDBLite consensus disorder prediction 584 611 - -
Pste4g02620 611 Coils Coil 294 321 - -
Pste4g02620 611 MobiDBLite consensus disorder prediction 33 48 - -
Pste4g02620 611 Pfam Myb/SANT-like DNA-binding domain 454 541 IPR044822 -
Pste4g02620 611 Pfam Myb/SANT-like DNA-binding domain 49 135 IPR044822 -
Pste4g02620 611 ProSiteProfiles Myb-like domain profile. 454 512 IPR001005 -
Pste4g02620 611 Coils Coil 586 606 - -
Pste4g02620 611 Gene3D - 456 517 - -
Pste4g02620 611 Gene3D - 51 112 - -
Pste4g02620 611 MobiDBLite consensus disorder prediction 259 280 - -
Pste4g02620 611 FunFam Trihelix transcription factor GT-2 456 517 - -
Pste4g02620 611 PANTHER FI21293P1 26 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02620 Pste-Chr4 18512622 18516242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02620 40 570 Trihelix Transcription Factor Family AT1G76880 52.364 3.39e-160 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pste4g02620 Myb_DNA-bind_4 1e-20 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01020 9 6891837 6895132 Pste4g02620 4 18512622 18516242 PCT