Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02614 CAATAAAACCCCTGAGAGACTATACTATTCCCTTTGTTTTCTGATATATTCCCTTTTTCTCAGGCTGTAATTGCTTACCTAGCTAGCTAGGTAGGGACATCTCTCTCTCTCTCTCTCTCTGCAGCTTCGAGACACCACAGTCATGGAAACCTCCTCCGGTGAGGCCGTGGCGGCGCATGACGGTGGCGAGGTGATTATGATGGACGCAAATTCCGGTGAAGAGTACAAGGGAAAAGAGGGTGGTGGAGAAGAAGAAAGTGACAAGATCAACAACTCATGCGGTGGAAACAGATGGCCCCGCCAAGAAACTTTGGCTCTCTTGAAGATAAGGTCCGATATGGATGCTATATTTCGAGATTCAAGTCTTAAGGGTCCACTTTGGGAAGAAGTTGCAAGGAAACTAGCAGAACTGGGTTATCACAGAAGCGCAAAGAAGTGCAAGGAGAAATTCGAGAATGTGTACAAGTACCACAAGAGAACCAAAGAGAGCAGAAGTGGGAAACACGAGGGAAAAACCTACAAGTTTTTCGATCAATTACAAGCCCTTGAGAAGCAATTCACAGTTTCTTACCCGCCAAAACCACAACCAACTTTGGCAACAACAAACACAGTGGCATTGCCACCCCCACCAAGGCCTAGTGACACAACAGCAATCTCTTATGTCACCACCACTGTTCCCTCCACAAACCCCACAGTCGTATCTCCTTCTCCGCCTCCACCAACCAATGCCACCATCACTTCTCCAACAGTAGTAACCAACCCTAGAAACCCTCCACAACCAAACAACAACAAAAATAACATCCCTTACTCTTTACCCAACATGAACAACCTCTTCTCAACCACTTCCACCTCTTCTTCCACGGCCTCTGACGAGGACTTGGAAGAGAAGTACAGGAAGAAGAGAAAATGGAAGGACTACTTCAGGAGGCTCACGAGGCAAGTCTTGGCCAAGCAAGAGGAAATGCAGAAGAGGTTCCTCGAAGCCATTGACAAAAGGGAGAGGGAACACGTCGCACAACAAGAGGCTTGGAGGATCCAAGAAATGGAAAGGATCAATAGAGAACACGAACTTCTTGTCCAAGAAAGATCAACTGCAGCAGCAAAAAATGCAGCAGTTATTGCTTTTTTGCAACAATTATCTGGTCAGCACCAAAATCCCACAACACAACCTGGTGCCAGTTTCCTTCAACAACCACCTCCACCCCAAGTGTCACATGTACAACCACCACCACCACAACAACAAGCGCCACAACCACCAGCACCATTGGTGGTGTCAAATAGCAACATTAATGTTGAAACTCAGAAGATGAATAATGGTCACAGTGTTTTTGCCGCTCCTGTTACTCCTACTGCTGTTGTTAATGCTACTTCCACTGTTGTTACTACCACTCCTACTTCGTTAAGCTCTTTATCTTCTTCTAGGTGGCCCAAGGCAGAAGTTCATGCTTTGATAAGGTTGAGGACGAGTCTTGAAGCTAAGTACCAAGAAAATGGACCAAAGGCCCCACTGTGGGAGGATATATCAGCAGGAATGTTGAGACTCGGGTACAACAGGAGTGCCAAGAGATGCAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAGAAAGTCAAGGAGGGCAACAAGCAAAGGCGTGAGGATAGTAAGACGTGTCCCTATTTTCACGAACTGGATGCTTTATACAAAGAAAAGGGCAAAACTCAGAACCCCTTTGGCATTTTATTCCAGAACATGAAGCCGCATGAGATGATGGAACCGTTGATGGTGCAACCGGAGCAGCAATGGAGACCTCCCTCTCAATATGAACAAGGTGCAGCGAAGGAGAACGATGAAAGTGGATATGAAAGAACAGAAAGAGAGGATGAGGAGGGAGAAGATGATGAAGAAGAAGAGGATGATAACGAAGAGGGAGATCTAGAGAGTGTGGAAGATGAAGGAGGTAGCCGTTATGAGATTGCGACAAATAAACTTTCTTCAATGGACACAGTTGAATGAGACAAGATAAGGAAGTTTCTGATTGGATGATGGAGAGTTTTTTTTTTTTAATTTTAATTTATTTTTTTGGGGTTTTAATTATTTAATTTGATTTGAAATTTCCAATTTGGGGTTAGGAGATGTCAGTGAAAGGGTTGTAATAGCAGATACACACTAAAGGGCATGCCACAAACACAAACACAAACACCTGCACTATAAAATTCAATTCTTTAATAATGACCCATCTAAAAGCATGGTGGTGCACAAGGTAGCTATCTGACGCACTTTCTGATCATGGGCCAGCTTAAAAGCAGATCATTGGAGTTGTGGGTCACATTCCGGCCGCCATGAACTGGGATCAGAGTAAAGATCGTTAACACTAAGAACAGTTCACATGGGCCAGCAAAAGCAGAAGCTATAGTGGGTGTACATGTTTTAGAGCTCATAAATTTATGTGTAAAGTGTAAATTGAACATGACAGAGAGAGAAAATGAGGTCCCATGGGAGTTTAAAACAATAAAATAAAATAAAAAAAAAGTCACATGCAACTCTTGTAATTTTCCTTTACTTTCATTATATATCACGGAACCACTGTGTAGTACTGCTTTC 2584 0.4361 METSSGEAVAAHDGGEVIMMDANSGEEYKGKEGGGEEESDKINNSCGGNRWPRQETLALLKIRSDMDAIFRDSSLKGPLWEEVARKLAELGYHRSAKKCKEKFENVYKYHKRTKESRSGKHEGKTYKFFDQLQALEKQFTVSYPPKPQPTLATTNTVALPPPPRPSDTTAISYVTTTVPSTNPTVVSPSPPPPTNATITSPTVVTNPRNPPQPNNNKNNIPYSLPNMNNLFSTTSTSSSTASDEDLEEKYRKKRKWKDYFRRLTRQVLAKQEEMQKRFLEAIDKREREHVAQQEAWRIQEMERINREHELLVQERSTAAAKNAAVIAFLQQLSGQHQNPTTQPGASFLQQPPPPQVSHVQPPPPQQQAPQPPAPLVVSNSNINVETQKMNNGHSVFAAPVTPTAVVNATSTVVTTTPTSLSSLSSSRWPKAEVHALIRLRTSLEAKYQENGPKAPLWEDISAGMLRLGYNRSAKRCKEKWENINKYFKKVKEGNKQRREDSKTCPYFHELDALYKEKGKTQNPFGILFQNMKPHEMMEPLMVQPEQQWRPPSQYEQGAAKENDESGYERTEREDEEGEDDEEEEDDNEEGDLESVEDEGGSRYEIATNKLSSMDTVE 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02614 617 MobiDBLite consensus disorder prediction 334 377 - -
Pste4g02614 617 SMART sant 47 109 IPR001005 -
Pste4g02614 617 SMART sant 424 486 IPR001005 -
Pste4g02614 617 MobiDBLite consensus disorder prediction 25 39 - -
Pste4g02614 617 MobiDBLite consensus disorder prediction 346 371 - -
Pste4g02614 617 Gene3D - 428 489 - -
Pste4g02614 617 Gene3D - 51 112 - -
Pste4g02614 617 CDD GT1 49 114 - -
Pste4g02614 617 MobiDBLite consensus disorder prediction 568 595 - -
Pste4g02614 617 ProSiteProfiles Myb-like domain profile. 49 107 IPR001005 -
Pste4g02614 617 MobiDBLite consensus disorder prediction 198 222 - -
Pste4g02614 617 Pfam Myb/SANT-like DNA-binding domain 426 513 IPR044822 -
Pste4g02614 617 Pfam Myb/SANT-like DNA-binding domain 49 135 IPR044822 -
Pste4g02614 617 FunFam Trihelix transcription factor GT-2 428 489 - -
Pste4g02614 617 MobiDBLite consensus disorder prediction 23 49 - -
Pste4g02614 617 MobiDBLite consensus disorder prediction 179 222 - -
Pste4g02614 617 FunFam Trihelix transcription factor GT-2 51 112 - -
Pste4g02614 617 CDD GT1 427 491 - -
Pste4g02614 617 MobiDBLite consensus disorder prediction 545 617 - -
Pste4g02614 617 Coils Coil 578 598 - -
Pste4g02614 617 ProSiteProfiles Myb-like domain profile. 420 484 IPR001005 -
Pste4g02614 617 PANTHER FI21293P1 25 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02614 Pste-Chr4 18473992 18477429 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02614 47 547 Trihelix Transcription Factor Family AT1G76890 47.719 1.06e-138 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pste4g02614 Myb_DNA-bind_4 4.5e-22 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01019 9 6865545 6869518 Pste4g02614 4 18473992 18477429 PCT