Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02576 GGTTTTAGTTCAGTGCCTCGTACTCGGGACTTCATTAGCCGCAGCGGGAGCAACCTCAGGAGGAGAAGGATGTCTCACAGGAAGTTCGAACACCCAAGGCACGGGTCTCTGGGATTTCTCCCCAGAAAGCGTGCTGCTCGTCACAGAGGAAAAGTGAAGGCATTCCCAAAGGATGACCCATCCAAGGCACCCAAGCTCACTGCATTCTTGGGTTATAAGGCTGGTATGACTCACATTGTTAGAGAGGTCGAGAAGCCAGGATCAAAACTTCACAAGAAGGAAACTTGTGAGCCTGTTACAATTATTGAAACCCCTCCAATGGTTATTGTTGGTGTTGTGGGTTATGTGAAAACTCCTCGGGGACTTCGAACATTGAACACTGTATGGACTCAGCACTTGAGTGAGGAATTGAAACGTAGGTTCTACAAGAACTGGTGCAAGTCCAAGAAGAAGGCATTCACCAAGTACTCAAAGCAATATGAAACTGAGGATGGAAAGAAAAACATTGAGGCGCAGCTGGAGAAACTGAAGAAGTATGCTACTGTGGTTCGTGTTTTGGCTCACACTCAGATCAGGAAAATGAAAGGGTTGAAGCAGAAGAAAGCCCATCTCATGGAAATTCAAGTTAACGGTGGTACTATTGCACAGAAGGTGGACTTTGCATACAGTTTCTTTGAGAAACAGGTTCCTATTGATGCTGTATTCCAGAAGGATGAGATGATAGACATCATAGGGGTGACAAAGGGTAAGGGTTATGAAGGTGTTGTAACTCGTTGGGGTGTTACCCGCCTACCCCGGAAGACTCACAGGGGTCTGAGGAAGGTGGCTTGTATTGGTGCGTGGCACCCTGCAAGGGTTTCATTCACTGTTGCCAGGGCTGGTCAAAATGGATACCATCACAGAACTGAGTTGAACAAGAAGGTTTACAAGCTCGGCAAAGCTGGTGATGAGTCCCACACTGCTCTTACCGAGTTTGATAGGACTGAGAAAGACATTACCCCAATGGGTGGTTTCCCTCACTATGGTATTGTCAAGGATGATTATATCATGGTCAAAGGATGCTGTGTTGGTCCCAAGAAAAGGGTTCTCACATTGCGTCAATCCTTGCTTAAGCAAACTTCTCGTGTTGCACTTGAGGAGATCAAACTCAAGTTTATCGACACTTCTTCAAAGTTTGGACATGGTCGTTTCCAGACCACACAGGAGAAGCAGAAGTTCTTTGGACGCGTCAAAGCATAATCATATTAATTGTTTGGAAATGTTGGAGGGTACTTTTAGAATTCAACAATTTGGTTACATCTTTTACCAACTTTGTAGTGTTTCCGTTTTGACATGATGGAACCTCGGTAGTGAGTTTTTTTTTCCTTTCATAATTTGGCCAAAACTTTTAAGTCAGACTTGATCGTTTCTAAACATTTCAAATTTTGTTTATGATTCTATATTTTCTGTGTTTAAGGAGTTTGCAAATTTATTTAAGCTTTTATTGTAACTAAAATCGATCCTTGCATTCATAGGTTATTGTAACTAAATTCATGATCGTTGCATTCATAGTTGCAGGCCTCTGCTGATTTCTTAGATCTGGTGGTAAATTTGGGTGTTCTGATTTTTATTTGTTATTATATATAAAATATTGTAAAATTTTG 1643 0.4218 GFSSVPRTRDFISRSGSNLRRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKAPKLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWTQHLSEELKRRFYKNWCKSKKKAFTKYSKQYETEDGKKNIEAQLEKLKKYATVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHTALTEFDRTEKDITPMGGFPHYGIVKDDYIMVKGCCVGPKKRVLTLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRVKA 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02576 412 MobiDBLite consensus disorder prediction 1 37 - -
Pste4g02576 412 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 24 407 IPR045077 GO:0003735|GO:0005840|GO:0006412
Pste4g02576 412 FunFam 60S ribosomal protein L3 67 182 - -
Pste4g02576 412 Gene3D Translation factors 67 408 - -
Pste4g02576 412 SUPERFAMILY Translation proteins 27 393 IPR009000 -
Pste4g02576 412 ProSitePatterns Ribosomal protein L3 signature. 235 258 IPR019926 -
Pste4g02576 412 Gene3D - 106 230 - -
Pste4g02576 412 FunFam 60S ribosomal protein L3 24 97 - -
Pste4g02576 412 Gene3D Ribosomal protein L3, domain 3 24 297 IPR044892 -
Pste4g02576 412 FunFam 60S ribosomal protein L3 249 297 - -
Pste4g02576 412 Pfam Ribosomal protein L3 24 393 IPR000597 GO:0003735|GO:0005840|GO:0006412
Pste4g02576 412 FunFam 60S ribosomal protein L3 106 230 - -
Pste4g02576 412 FunFam Ribosomal protein L3 288 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02576 Pste-Chr4 18210855 18214286 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02576 24 410 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 87.080 0.0 702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02576 4 18210855 18214286 Pste4g02576 4 18210855 18214286 ECH