Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02573 TTTTGGGACAGAAGCACAAAGTTGAAAAAATCCCAGAGCTAGCTGGAGCTGAAGCTAGCTCGAGCTACAGACGGAGAGTAAGACCTAAAAGCATAACATACACAAATTTTTGAAGATGGTTAGAGCTCCTTGTTGTGAAAAGATGGGACTGAAGAAGGGCCCTTGGACTCAAGAGGAAGATCAAATCCTCATATCTTACATCCAAAAACATGGCCATGGTAACTGGCGTGCCCTCCCAAAGCTTGCAGGGCTATTAAGGTGTGGAAAGAGCTGCAGACTAAGGTGGATTAACTATTTAAGGCCTGATATCAAGAGAGGAAATTTCTCAAGTGAAGAAGAGGAAATTATCATTAAGATGCATGAGTTACTGGGGAACAGGTGGTCAGCAATAGCAGCAAAATTACCAGGAAGAACAGATAATGAAATAAAAATCACAGTAACTCAATCAGAACCTACATCATCGTCAGCATGCACTTCTTCCAGTGATTTTTCATCATCATTTAGTGAAGGGAGTAAAAACATGGACAAGATCATCAAGAGTGAAGACATTGAGTCTGAGGAAACAATGCCTCCAATTGATGAAAGCTTTTGGTCAGAGGCAACAGTGGAGTATGAAAGCTCCACCATGCCATCAAATTCTTGGGCAATTTCAAATGATCAATTTGCACCCCCTCAGTACCAATTTAATTCAGTTGAAACCTTCCAACAACACAGTTTTGATTATAATGGTTCAAACTTTGATGATGGCATGGATTTCTGGTATGACATATTCTTCAGATCAGGGGAGTCGATTGAATTGCCCGAGTTCTGA 811 0.4081 MVRAPCCEKMGLKKGPWTQEEDQILISYIQKHGHGNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFSSEEEEIIIKMHELLGNRWSAIAAKLPGRTDNEIKITVTQSEPTSSSACTSSSDFSSSFSEGSKNMDKIIKSEDIESEETMPPIDESFWSEATVEYESSTMPSNSWAISNDQFAPPQYQFNSVETFQQHSFDYNGSNFDDGMDFWYDIFFRSGESIELPEF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02573 231 FunFam MYB-related transcription factor 13 66 - -
Pste4g02573 231 Gene3D - 69 106 - -
Pste4g02573 231 CDD SANT 16 61 IPR001005 -
Pste4g02573 231 SMART sant 66 114 IPR001005 -
Pste4g02573 231 SMART sant 13 63 IPR001005 -
Pste4g02573 231 CDD SANT 69 105 IPR001005 -
Pste4g02573 231 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pste4g02573 231 Pfam Myb-like DNA-binding domain 67 105 IPR001005 -
Pste4g02573 231 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pste4g02573 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Pste4g02573 231 SUPERFAMILY Homeodomain-like 10 105 IPR009057 -
Pste4g02573 231 ProSiteProfiles Myb-like domain profile. 62 105 IPR001005 -
Pste4g02573 231 Gene3D - 13 66 - -
Pste4g02573 231 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 160 - -
Pste4g02573 231 MobiDBLite consensus disorder prediction 109 131 - -
Pste4g02573 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 105 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02573 Pste-Chr4 18189860 18192084 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02573 1 231 MYB Transcription Factor Family AT1G06180 47.328 2.52e-68 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste4g02573 Myb_DNA-binding 7.5e-16 CL0123