Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02569 TAAAAAGGAAACCGACAACACTAAGGATTTGCAGAAAGTGCAGCTAGTTAGTTCCATTTTGCATCGCCCATTAACTTCGAGTCAAAACCTCTTTAGGTGTGAATTCCACATGCCAAAATCATCACAGAGGCTGCAACCTGAACCTGAACCGCATATTTCTCCTTTATTTATTGACGTGGTTTTAACGGTGGCGCACCAGGGAGGTTGGGGAAAGTTCGGGGCGGAGGAAGGAGGCGATGAGGAAGGCGAAGACAGTCTCATCCCAAGAAGGGAGGGGAGAGTGGCGGTGGCAATGCAAGGGAGTGGTACTGTATCGAGTCATATGTCAGCTTCGGGGCAAAGCAGCAGGGAGTGGGTCCCGACAAGTGGTTCTCCCATGATGTCACGTTTTATGCATGCATCTTCTCCTCCTGGGCCTCCTCTCTTGGGCTCACAGTCGGGTTGGGTTGGGCATAAAAGAGCGCGTGAAGATGACACTGGGGCAGGTGCGAGTGTAGCAGCTTCACAAACACAAGCCAGTGGGAGTGGGAGTGGGAGTGAAGAAAGCGGGGAGAGGACGAGGAGATACAGAGGAGTGAGGCAGAGGCCGTGGGGGAAATGGGCGGCTGAGATCCGTGATCCTCACAAAGCAGCCAGAGTGTGGCTTGGAACATTCGACACTGCCGAAGCTGCAGCCAGGGCCTATGATGAAGCCGCATTGAGGTTCAGAGGTAACAGAGCCAAACTTAATTTCCCAGAAAACGTTCCACCTCCTGTTCCGGAATTACCGGCCACTGCTGTTGCCGGTTCAGGTTCTGCTTCCGGACTGCCAGGCTTTTTGCCAACCGTGATGCAGGGTGCACCATTTCAGGGCACCTCTGATATGCTCAGAGACTATTGGGGTTATTCTCAGCTGCTGCGGAGCACAGGGGAATTCCATGGACTCGATCAGTGGTTCTTTGATTCGCAAATGGCACCGCTTCACTCCTCTTCTTCCTCATCCTTTTTAGCGCCATCGTTTTCGCCCTCCTCTGCTTCGCTTCCTCTGTTTTCTAGCCCGCAAATAGGGAGTTTCCGGCCCCCGGGAGACCAGTCACACGGCCCAGACGACGCTGCTACTGGGTCACAGTTTACACCTTCCACGTGGTCAGATACCAGTGGCTATCCTCCTCCACCATCGGGTTGA 1165 0.5365 MPKSSQRLQPEPEPHISPLFIDVVLTVAHQGGWGKFGAEEGGDEEGEDSLIPRREGRVAVAMQGSGTVSSHMSASGQSSREWVPTSGSPMMSRFMHASSPPGPPLLGSQSGWVGHKRAREDDTGAGASVAASQTQASGSGSGSEESGERTRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGNRAKLNFPENVPPPVPELPATAVAGSGSASGLPGFLPTVMQGAPFQGTSDMLRDYWGYSQLLRSTGEFHGLDQWFFDSQMAPLHSSSSSSFLAPSFSPSSASLPLFSSPQIGSFRPPGDQSHGPDDAATGSQFTPSTWSDTSGYPPPPSG 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02569 351 MobiDBLite consensus disorder prediction 127 144 - -
Pste4g02569 351 FunFam Ethylene-responsive transcription factor 2 151 210 - -
Pste4g02569 351 Gene3D AP2/ERF domain 151 211 IPR036955 GO:0003700|GO:0006355
Pste4g02569 351 PANTHER DNA-BINDING DOMAIN 116 261 IPR044808 GO:0003700|GO:0009873
Pste4g02569 351 SMART rav1_2 152 215 IPR001471 GO:0003700|GO:0006355
Pste4g02569 351 MobiDBLite consensus disorder prediction 326 341 - -
Pste4g02569 351 MobiDBLite consensus disorder prediction 308 351 - -
Pste4g02569 351 SUPERFAMILY DNA-binding domain 152 210 IPR016177 GO:0003677
Pste4g02569 351 ProSiteProfiles AP2/ERF domain profile. 152 209 IPR001471 GO:0003700|GO:0006355
Pste4g02569 351 Pfam AP2 domain 152 201 IPR001471 GO:0003700|GO:0006355
Pste4g02569 351 PRINTS Ethylene responsive element binding protein signature 175 191 IPR001471 GO:0003700|GO:0006355
Pste4g02569 351 PRINTS Ethylene responsive element binding protein signature 153 164 IPR001471 GO:0003700|GO:0006355
Pste4g02569 351 MobiDBLite consensus disorder prediction 63 86 - -
Pste4g02569 351 CDD AP2 152 208 IPR001471 GO:0003700|GO:0006355
Pste4g02569 351 MobiDBLite consensus disorder prediction 34 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02569 Pste-Chr4 18132665 18134142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02569 126 212 AP2-EREBP Transcription Factor Family AT2G33710 66.667 1.13e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste4g02569 AP2 6.4e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g00985 9 6348727 6351425 Pste4g02569 4 18132665 18134142 PCT