Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02567 ATGTCCACCCCCAGAAGAAAACTACCCTTTAACACCGTCTCCGTCAGCCTCGGCTGCGGCAGCTGCAGGAGGCCCAGGCTTCTCCGCCACATTTTCCACCCCAAACGGAGGCCCACTTACCAGGCCCATGGCCTACATTGGGACGATACTGCTACAAGCAGTAGCGCCACCAATACTTCTGCTGCCACATTCTCGCCCTGCTACGTTGAACCCTCGCAGTCTGTGCGAGGATTCGCACGTGCAGGAAGCGATAGTGTGGCAGTAGAAAAAGAGTCTCATGACCCTTACTTGGACTTCAGGCACTCCATGTTGCAGATGATACTGGAGAACGAGATATACTCCAAAGACGATCTCAGAGAGCTTCTTAACTGCTTTCTTCAGCTCAATTCGCCGGACCATCATGGGGTTATAGTCAGAGCGTTCACTGAGATCTGGAATGGCGTTTTCTCTGTGAAGTCTGGTTCCAACGGGTTCCACCTCAACCCCAGCTTAGCTTTGCAGGTTTTGAGTGGCAAAGCAACAACGGTGGGAAAACATAGGCATTGGGATTTGAATAACAATAATATGAATGGTCCAACTTCAGAGAGACACAAGATTGATAAACTGAAAGGGGATAGTGGCAGATTTTCAGCTGCAGATTTCTGTGAGTTCAATCTTCAAAAGATGGATTTAAATGTTGCCTACTTTGAAGGGATGGTCAACTCTAGCAGGGCATCTTCATGGTAG 726 0.4904 MSTPRRKLPFNTVSVSLGCGSCRRPRLLRHIFHPKRRPTYQAHGLHWDDTATSSSATNTSAATFSPCYVEPSQSVRGFARAGSDSVAVEKESHDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNSPDHHGVIVRAFTEIWNGVFSVKSGSNGFHLNPSLALQVLSGKATTVGKHRHWDLNNNNMNGPTSERHKIDKLKGDSGRFSAADFCEFNLQKMDLNVAYFEGMVNSSRASSW 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02567 241 NCBIfam uncharacterized plant-specific domain TIGR01568 86 146 IPR006458 -
Pste4g02567 241 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Pste4g02567 241 ProSiteProfiles OVATE domain profile. 88 147 IPR006458 -
Pste4g02567 241 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 65 150 IPR038933 GO:0045892
Pste4g02567 241 Pfam Transcriptional repressor, ovate 92 148 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02567 Pste-Chr4 18128196 18132860 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pste4g02567 Ovate 4.2e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02567 4 18128196 18132860 Pste4g02567 4 18128196 18132860 ECH