Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02558 GGGAGGGCGGTTGGGTTAAAGAAAGTGGAAATCGCAAATGGATTCCTTAGAAGACAGCGGCTGTTGGGATTTTCTCGATTACTCTTTCATCGATCAAGCGCCCCCTGATTTCCTTTGGTCCAATAACAGTTTGAGCGCTGAAATTGATACTCCAGATGATGCTGCTGCTTTTCCAGAGAATACCAGGAAGAGGGGACGCAGTGATTCATGCTGCAAGGCAGGGTTCTGTGACTTGAGCTCTGTTTTGGAACCTGGGAGACCTGTGAGAACAGATAAACCAGCTATACTTGATGATGCTATCAGAGTCTTGAGCCAACTTAAAACTGAAGCTCAGGAGCTCAAGAAAACAAATGAAAAATTATTAGGGGAAATAAAATGTTTAAAGGCTGAGAAAAATGAACTTCGTGAAGAGAAACTTGTTCTGAAAGCAGATAAGGAAAGGATAGAGAAGCAGTTGAAAGCCTTGCCGATTGCACCAGCAGGGTTTATGGCTCCCCCAGTGACTGCAGCATATCAAGCAGGGGTGAACAAGATGGCTATGTATCCAAACTATGGCTATATCCCAATGTGGCAATATCTTCCTCAATCTGCCAGAGACACATCTCATGATCATGAGCTCAGGCCTCCTGCTGCATAGTTCCTGCTATTGTTTTGTCCTTTTGATCATTTTACATCCATCATTTCACAACATTCTCGAAGTGTTGACATGTAAATATTGTCATGGCTTCGATCTGTTTTTTTTTTTTGTACTTAGTATGATTTAAAATAGGATTACAGTTTACCAGTAATCTATGATGGCAATGACACGAAAACTCTATTGATGTTCATTGCAAACTGTCCAGTTCTTCACTTCATGGTAGCTTGCTAAATTCAAAATGTGAATTTTTTAGAAGGGATTTCTTAAAATCTAAAGTGATGCTGCCTAG 926 0.4093 MDSLEDSGCWDFLDYSFIDQAPPDFLWSNNSLSAEIDTPDDAAAFPENTRKRGRSDSCCKAGFCDLSSVLEPGRPVRTDKPAILDDAIRVLSQLKTEAQELKKTNEKLLGEIKCLKAEKNELREEKLVLKADKERIEKQLKALPIAPAGFMAPPVTAAYQAGVNKMAMYPNYGYIPMWQYLPQSARDTSHDHELRPPAA 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02558 199 Coils Coil 84 139 - -
Pste4g02558 199 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 60 121 IPR036638 GO:0046983
Pste4g02558 199 Gene3D - 83 144 - -
Pste4g02558 199 PANTHER BHLH TRANSCRIPTION FACTOR 7 199 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02558 Pste-Chr4 18009839 18014757 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02558 49 199 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 60.119 4.71e-63 195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02558 4 18009839 18014757 Pste4g02558 4 18009839 18014757 ECH