Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02542 CCAAAACAATGATGGCTAGAGGAGTTAGTGGCAGTGGCACTACTCCCTTATTGTGCTCTTTCTTCTTTATTTCTTGGCTACTTTTTGCTTCCAGCAGCCATGCCTCCTCTGAAGCACTGAAAAGGCCTCCAATTGTGGATGGACTGTCATGGAATTTTTACTTTTCGAGCTGTCCCATGCTTGAAACCATAGTCAGCAGGCATCTTAGGAAGGTGTTTAGGAAGGACACTGGTCAAGCCCCTGCTTTGCTCAGGATCTTTTTCCATGACTGCTTCGTTCAGGGCTGCGATGGGTCGATATTGTTGGATGGAAATCCAAATGAAAGGGATCAACCAGCAAACATAGGGATAAGACCTGAGGCCTTGAAGACCATTGAAGACCTTAGAGCTCTTGTTCACATTCAGTGTGGAAGGGTTGTCTCTTGCGCAGACCTCGTTGTTCTAGCAGCACGCGACGCTGTTGCTCTGTCAGGGGGCCCAAGATTCCCTGTGCCACTGGGAAGAAAGGATGGCTTAAGCTTCAGCATAAACGGAACGGGAAACCTTCCACCACCATTTTTCCGAACCGGACAGCTCCTGGAAAGATTTGGCGGCAGAAACTTCGACGCCACAGACGTTGTCGCACTCTCGGGCGCACACACGTTCGGGCGGGCCCACTGTGCCACATTCTTCAACCGTATAAACCAGACAGAGCCACCCATCGACACCTCCTTGGCCAACAACCTCAGCAACACGTGTCCCAGCGCGCAGTCCCCAAACACCGCGGTGCTGGACGTGCGAAGCCCCAACGTGTTCGACAACTTGTACTACGTTAACCTGAAGAACCGGCAGGGTCTGTTTACCTCTGACCAGGATCTGTTCAGTGACGCCAGGACTAAGGGGATTGTGAACTCTTTTGCTTCCAATCAGACACTGTTCTTTGACAAGTTTGCCACTGCCATTATCAAGTTGAGTCAGTTGGATGTGCTCACCGGAAAACAAGGACAGATTCGCGCCAAATGCTCCATCCCCAACTCCAAGAACCTAGTCACCTCTGTGGTGGAAGAGGATTCCACTGCTCAGATGTGAAATTAACTCTCGTTTCTTAATAAATTAATGCTCTAGTTTTCTACACTTTCTCACTCACTCACAGAAAGGAGTTTCTCCTTCCCTCTCTATCTGCATTCTGCACTGCCTTCGCCCTGTTGTTTTTATAACATTTTATTCTGTGTCA 1212 0.4926 MMARGVSGSGTTPLLCSFFFISWLLFASSSHASSEALKRPPIVDGLSWNFYFSSCPMLETIVSRHLRKVFRKDTGQAPALLRIFFHDCFVQGCDGSILLDGNPNERDQPANIGIRPEALKTIEDLRALVHIQCGRVVSCADLVVLAARDAVALSGGPRFPVPLGRKDGLSFSINGTGNLPPPFFRTGQLLERFGGRNFDATDVVALSGAHTFGRAHCATFFNRINQTEPPIDTSLANNLSNTCPSAQSPNTAVLDVRSPNVFDNLYYVNLKNRQGLFTSDQDLFSDARTKGIVNSFASNQTLFFDKFATAIIKLSQLDVLTGKQGQIRAKCSIPNSKNLVTSVVEEDSTAQM 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02542 352 FunFam Peroxidase 180 314 - -
Pste4g02542 352 PRINTS Haem peroxidase superfamily signature 137 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste4g02542 352 PRINTS Haem peroxidase superfamily signature 77 91 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste4g02542 352 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste4g02542 352 PRINTS Haem peroxidase superfamily signature 155 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste4g02542 352 PRINTS Haem peroxidase superfamily signature 202 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste4g02542 352 ProSitePatterns Peroxidases proximal heme-ligand signature. 202 212 IPR019793 -
Pste4g02542 352 Gene3D - 49 332 - -
Pste4g02542 352 ProSiteProfiles Plant heme peroxidase family profile. 45 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste4g02542 352 FunFam Peroxidase 49 187 - -
Pste4g02542 352 SUPERFAMILY Heme-dependent peroxidases 41 336 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pste4g02542 352 ProSitePatterns Peroxidases active site signature. 77 88 IPR019794 GO:0004601
Pste4g02542 352 Gene3D Peroxidase, domain 2 181 315 - -
Pste4g02542 352 PRINTS Plant peroxidase signature 201 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste4g02542 352 PRINTS Plant peroxidase signature 79 99 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste4g02542 352 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste4g02542 352 PRINTS Plant peroxidase signature 55 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste4g02542 352 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste4g02542 352 PRINTS Plant peroxidase signature 136 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste4g02542 352 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste4g02542 352 PRINTS Plant peroxidase signature 155 170 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste4g02542 352 CDD secretory_peroxidase 45 332 IPR033905 GO:0004601|GO:0042744
Pste4g02542 352 PANTHER - 23 335 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste4g02542 352 Pfam Peroxidase 63 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02542 Pste-Chr4 17914456 17918186 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02542 11 346 Peroxidase AT1G71695 53.179 1.27e-125 363