Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02540 TGTCTCCTCATCTTTAAATACCAGAGATGCCTTGCCACATCTGAAATCACTACATTGCTAAGTATAATTAATCATGGCTTCTATTTCTTGTAGGAGTGCTATTTTCAGCTTTGTTCTCATCTGTTCCTTTGTTTCTGTTTTCAATATCATAGTGTGTGAGGCACAAGCCCAGCCTCCTACAGCAAAAGGGCTATCATATACCTTCTACGCTAAAAGCTGTCCTAAGCTTAAATCTATCGTTAGATCAGAACTCCAAAAGGTCTTCAAGAAGGACATTGCTCAAGCTGCTGGCTTGCTTCGACTTCACTTCCATGACTGCTTTGTTCAGGGTTGTGATGGGTCAGTTTTGTTGGATGGATCAGCCAGTGAGCCGAGCGAAAAAGATGCACCACCAAACTTGACTTTGAGAGCTGAGGCCTTTAAGATCATCGAAAAAATTCGTGGTCTCTTAGAGAAGAACTGTGGAAGAGTCGTCTCTTGTTCCGACATCACTGCCCTCGCTGCACGTGACGCCGTCTACCTTGTAAGTTTTTCCTTAAGGATGGTCAATTTTGATAAGAACCCACTTTATGTTCCTGGTTGTACTTCAATAATAATTAATAATGAAAAACAAATCTAA 619 0.412 MASISCRSAIFSFVLICSFVSVFNIIVCEAQAQPPTAKGLSYTFYAKSCPKLKSIVRSELQKVFKKDIAQAAGLLRLHFHDCFVQGCDGSVLLDGSASEPSEKDAPPNLTLRAEAFKIIEKIRGLLEKNCGRVVSCSDITALAARDAVYLVSFSLRMVNFDKNPLYVPGCTSIIINNEKQI 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02540 181 PRINTS Plant peroxidase signature 114 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste4g02540 181 PRINTS Plant peroxidase signature 73 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste4g02540 181 PRINTS Plant peroxidase signature 133 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste4g02540 181 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste4g02540 181 PRINTS Haem peroxidase superfamily signature 134 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste4g02540 181 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste4g02540 181 ProSiteProfiles Plant heme peroxidase family profile. 39 181 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste4g02540 181 ProSitePatterns Peroxidases active site signature. 71 82 IPR019794 GO:0004601
Pste4g02540 181 SUPERFAMILY Heme-dependent peroxidases 39 153 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pste4g02540 181 Gene3D - 40 164 - -
Pste4g02540 181 Pfam Peroxidase 56 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste4g02540 181 PANTHER PEROXIDASE 25-RELATED 20 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste4g02540 181 FunFam Peroxidase 43 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02540 Pste-Chr4 17897447 17899716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02540 10 150 Peroxidase AT1G71695 54.795 4.48e-51 166