Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02522 ATCCTCAAACGGCCAGCACCCACAGCATCGGCGGCGGCGGCGACGATCACTCTCAACAGGCTAAAATGTCTCTGGTGGCGAATGAGGATTTCCAGCACATTCTACGTGTGCTGAACACTAACGTCGATGGCAAGCAGAAGATAATGTTCGCTCTCACATCCATCAAGGGTATTGGGAGGAGATTCGCCAACATGGCTTGCAAGAAGGCTGATGTTGACATGAACAAGAGGGCTGGTGAGTTGAGTGCTGCTGAGTTGGATAATCTGATGACTGTGGTTGCCAACCCAAGGCAATTCAAGATCCCAGACTGGAAGAAGGATTACAAGGACGGCAAATACTCACAGGTCGTGTCTAATGCTCTTGACATGAAGCTCAGGGATGACTTGGAGAGACTCAAGAAAATCAGAGTCAATTGTAGGTGGGTGGGTATATTTGTAACGTGTTTGCAGTCTTTGGTTGGTTTGTGCAACATGACATGTATGTTGAATTCTGCTAAATCTATGTGGGGTGGTAATGTTTCTTTGTCTGATAGTGGCTACAGAACTAAAATACATAGGACTCACATTAGTACTATTTTGCAGAAACCACTGAGGTTTGAGGCATTACTGGGGCCTTCGTGTCCGTGGTCAGCACACCAAGACTACTGGCCGAAGGGGAAGACAGTTGGTGTCTCCAAGAAGCGT 683 0.4744 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANMACKKADVDMNKRAGELSAAELDNLMTVVANPRQFKIPDWKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRVNCRWVGIFVTCLQSLVGLCNMTCMLNSAKSMWGGNVSLSDSGYRTKIHRTHISTILQKPLRFEALLGPSCPWSAHQDYWPKGKTVGVSKKR 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02522 206 Gene3D - 1 80 - -
Pste4g02522 206 Pfam Ribosomal protein S13/S18 14 114 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Pste4g02522 206 PANTHER 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 2 115 - -
Pste4g02522 206 Gene3D 30s ribosomal protein s13, domain 2 88 118 IPR027437 -
Pste4g02522 206 FunFam 40S ribosomal protein S18 1 80 - -
Pste4g02522 206 ProSiteProfiles Ribosomal protein S13 family profile. 15 114 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Pste4g02522 206 SUPERFAMILY S13-like H2TH domain 13 115 IPR010979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02522 Pste-Chr4 17798157 17800116 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02522 1 114 Cytoplasmic Ribosomal Protein Gene Family AT4G09800 90.678 9.02e-74 218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02522 4 17798157 17800116 Pste4g02522 4 17798157 17800116 ECH