Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02519 CCCTCTCTCTCTCTCTAAAACTCTCTATTCCCCCTCGAAACAACGGCGCTATACTCTTTCCTTCTATGGTTTTGGTTTAACACTCGTTCCAAAATCCAAACAAAACCACATTGCATATACATTCACACTTTTCTCACGCATTACACAATGCACACCCCTTCTCTCTCCCCTTTCTTTCTCTAATCCAACAACACAAAACTACTACTACAATGGTACCTTAACATCCACAACAAGTACAAGGACACAACTTGCATCATTTTTCCTCATCTGGGTGTCTCTTACTTGTGCTCTTTTCCATGTCCTACCCCTACCCTTTACTTGTCACACACAACAACACACCCGATTACAAGCCACGAGGTAGAACTTAGAAGCTGGATTTCTGCACTGTAAGCAAGTTTAGTGTTGGGATTTGTTGCATGCTAAAACCGGTTTCTTTGGCTTCTTTCCAGTGCTATATATAAAGGGTTGCACTTTTTTTTTCAATGCATAAACAACAATGAGGGATTCCGCGGGTTATTTTTTCTCTCGAAAGTTCCTCATGTTTATAGAATTTTCGTTCAAACTCTTGGAAACGATTGTCCATGCTGGGGAAGTGCTTATAAGAGTCTGTTTAGCTCGAAGGAGCAGGAGAAGATAGCTGAAGAAGCAACATCGGGAGTAGGAGGAAGAAATTGTTGAGGCCATTTCTTGTTTTTAAGTCACTTATTCACTGCCGTGTGAAGTGTGAATTAATTTGTATCACTACATGGATTGAAGAAGTACCACATTGGATCAATGTTAAAGGCAGTGTCATTTGAACTGTTGATTTACTTGGTCCTCCTCACATGTGTGTGTGCAGCAGACAATGGGTTTCCCAGATGTAACTGTGATGATGAGTCCAGCCTATGGACTATTGAGACCATTGTGGAGTGCCAGAGAGTTGGTGATTTTCTGATTGCTGTGGCCTACTTCTCCATCCCCATTGAGCTGCTTTACTTTGTTAGTTGCTCAAATTTCCCATTCAAGTGGGTCCTCTTTCAGTTCATTGCTTTCATTGTACTTTGTGGAATGACACATTTGTTGAATGGATGGACTTATGGTCCCCACACTTTTCAACTTATGGTGGGACTTACTATCTTCAAAATTCTCACTGCCTTGGTGTCATGTGCCACTGCCATAACCCTCCTCACTTTGATCCCTATGCTGTTGAAAGTGAAGGTTAGAGAATTAATGCTGAAGAAAAAGACCTGGGATCTTGGCAGGGAGGTTGGTATCATAATGAAACAAAAAGAGGCTGCAATGCATGTAAGAATGCTTACCCAAGAGATTCGAAAGTCTTTGGATAGGCATAAGATTCTGTACACCACCTTGGTGGAGCTGTCTAAGACACTTGGTTTGCAAAATTGTGCAGTGTGGATGCCAAATGTTGAGAGAACTGAGATGAACCTTACACATGAATTGAATGGCAGGAATTTTAACTTTTCTCTACCCGTAACTAATCCAGACGTTGCGAGAATCAAAGGAAGTGATGAAGTAAACATAATTGATTCTCATTCAGTACTTGCCACTGCTAGTAGTGGAGTTTCTGGTGTGGCAGGACCAGTTGCTGCAATCCGAATGCCTATGCTTCGGGTTTGCAATTTCAAAAGGGGAACACCAGAGTTAAGGCAGACGTGTTATGCCATATTGGTTTTGATTCTTCCCAGCGAAGAGCTTAGACCGTGGAGCGCTCAAGAGCTAGATATCATTAAGGTGGTTGCTGATCAAGTAGCTGTGGCTTTGTCTCATGCTGGGATTCTTGAAGAATCTCAGCTCATGAGGGAGAAGTTGGAGGAGCAAAATCGAGCCTTACAAGTGGAAAAGATGAATGCTATGATGGCGAACCAGGCGAGAGCCACATTTCAGAAGGTCATGAGTAATGGAATGAGAAGGCCTATGCACTCGATTTTGGGGTTGCTTTCCATAATGCAAGATGAGAATTTGAAGAGTGAACAGAAACTTGTTGTGAATTCAATGCTAAGGACTAGCACTGTCTTATCAAACTTGATCAATGATGCCATGGATTGCTCAACAAGGGATGATGGGAGATACCCTTTGGAGATGAAACCTTTTGGATTGCGTGCCATGGTGAAAGAGGCAGCTTGCCTTGCCAAGTTCATGAGTATTTATAAGGGCGTTGGTTTTGTGGTTGATGTTGATAAGTCTTTGCCAGACAATGTTATAGGTGATGAAAAGAGGATTTTTCAGGTGATTTTGCATATGGTTGCAAATGCAATTAATGGTAACCATGGAGGAGGGGTTCTTGTATTTCGAGTTTTTGCGGAAACTGGAAGTCAAGGAAGGAATGAGCAGGGATGGAACACCTGGAGACCAAGCTCTTCTAGTGGGGATGTAAATATTAGATTTGAGATAGGGGTCAATACTGGTGATCCTGAATTGGAGAGTTCAATTCGTTCAGGGCAGCTTGTGGGTACAAATCACGCTACTGAAAGGGTTGAGGAAAGATTGAGCTTTAGCATTTGCAAGAGGATAATCCAGACGATGCAAGGGAACATATGGTTAGTACCAAATGCTCAAGGTTTTCCACAAGTCATGGCCCTTTTTCTTCGGTTTCAATTGCGGCAATCTATTGCACTATCCATCGCTGAATCTGGGGAGACTTCTGAGCCATCCAATTCAAATTCATTCCTGAGAGGTCTGCAAGTGTTGTTGGCAGAAAACGACGATGTAAATAGAGCAGTGACACAGAAGTTGCTGCAGAAACTAGGCTGTGTTGTGACTTGTGTTTCTTCTGGATTTGAATGCCTTAGTGTCATTGGACCTGCTGGATCTTCCTTTCAAGTCATTCTTTTGGATCTTCACATGCCTGAGCTTGACGGCTTCGAAGTTGCAACGAGAATTCGCAAGTTCACAAGCCGAAATTGGCCTGTGATTGTTGCCTTGTCTGCAAGCGCAGAAGATTTGTACGACAGATGCATGCAAATAGGTATGAATGGAGTCATAAGAAAGCCAGTTTTGTTGCATGGAATTGCTAGTGAACTCAGAAGGATTCTGGTGCAGGGAAACAGTGTCATGTGATGAGGATTCATGCTGCAAGTTTAAGTTATAAAAAATTCACTCACATTCTTGATAGAATCGGTAGCACACAGCCATACACCACTCTTTGGCTCCCGTTTCCTATCAATATTTCAGCTTTGAGATTATGTGTTATACCCCAACAACTTTAATAAGAAAAGTAAATGATTCAAGTTAGTGT 3235 0.4223 MLKAVSFELLIYLVLLTCVCAADNGFPRCNCDDESSLWTIETIVECQRVGDFLIAVAYFSIPIELLYFVSCSNFPFKWVLFQFIAFIVLCGMTHLLNGWTYGPHTFQLMVGLTIFKILTALVSCATAITLLTLIPMLLKVKVRELMLKKKTWDLGREVGIIMKQKEAAMHVRMLTQEIRKSLDRHKILYTTLVELSKTLGLQNCAVWMPNVERTEMNLTHELNGRNFNFSLPVTNPDVARIKGSDEVNIIDSHSVLATASSGVSGVAGPVAAIRMPMLRVCNFKRGTPELRQTCYAILVLILPSEELRPWSAQELDIIKVVADQVAVALSHAGILEESQLMREKLEEQNRALQVEKMNAMMANQARATFQKVMSNGMRRPMHSILGLLSIMQDENLKSEQKLVVNSMLRTSTVLSNLINDAMDCSTRDDGRYPLEMKPFGLRAMVKEAACLAKFMSIYKGVGFVVDVDKSLPDNVIGDEKRIFQVILHMVANAINGNHGGGVLVFRVFAETGSQGRNEQGWNTWRPSSSSGDVNIRFEIGVNTGDPELESSIRSGQLVGTNHATERVEERLSFSICKRIIQTMQGNIWLVPNAQGFPQVMALFLRFQLRQSIALSIAESGETSEPSNSNSFLRGLQVLLAENDDVNRAVTQKLLQKLGCVVTCVSSGFECLSVIGPAGSSFQVILLDLHMPELDGFEVATRIRKFTSRNWPVIVALSASAEDLYDRCMQIGMNGVIRKPVLLHGIASELRRILVQGNSVM 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02519 760 Pfam Response regulator receiver domain 637 740 IPR001789 GO:0000160
Pste4g02519 760 SMART HisKA_10 365 430 IPR003661 GO:0000155|GO:0007165
Pste4g02519 760 FunFam Ethylene receptor 633 756 - -
Pste4g02519 760 Coils Coil 335 362 - -
Pste4g02519 760 ProSiteProfiles Histidine kinase domain profile. 372 587 IPR005467 -
Pste4g02519 760 Gene3D - 429 607 IPR036890 -
Pste4g02519 760 SUPERFAMILY CheY-like 632 753 IPR011006 -
Pste4g02519 760 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 354 430 IPR036097 GO:0000155|GO:0007165
Pste4g02519 760 SMART gaf_1 183 339 IPR003018 GO:0005515
Pste4g02519 760 Gene3D - 331 428 - -
Pste4g02519 760 CDD REC_ETR-like 635 749 - -
Pste4g02519 760 CDD HisKA 363 423 IPR003661 GO:0000155|GO:0007165
Pste4g02519 760 FunFam Ethylene receptor 4 332 426 - -
Pste4g02519 760 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 26 755 - -
Pste4g02519 760 SMART REC_2 635 753 IPR001789 GO:0000160
Pste4g02519 760 Gene3D - 615 753 - -
Pste4g02519 760 Gene3D - 162 330 IPR029016 -
Pste4g02519 760 SUPERFAMILY GAF domain-like 186 332 - -
Pste4g02519 760 PIRSF Ethylen_sen_hybr_HK 1 760 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Pste4g02519 760 Pfam GAF domain 183 329 IPR003018 GO:0005515
Pste4g02519 760 CDD HATPase_ETR2_ERS2-EIN4-like 471 604 - -
Pste4g02519 760 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 419 507 IPR036890 -
Pste4g02519 760 ProSiteProfiles Response regulatory domain profile. 636 753 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02519 Pste-Chr4 17761541 17765857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02519 21 753 Miscellaneous Gene Families AT3G04580 56.933 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste4g02519 GAF 3.7e-13 CL0161