Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02513 ATGCCTGGAGGTTGTATAATGATTGATAACCATAACATCCAAAACATTCGGTTGGCAAGTTTGAGAAGACATATCAGTGTTGTTTCTCAAGATATAACTCTTTTTTCAGGTACAGTAGCTGAAAACATTGGTTATAGGGATCTGACAACCAAAATTGACATGGAGAGGGTGATGCATGCAGCTCAAACTGCTAATGCAGATGAGTTTATTAAAAAACTTCCGGAAGGATACAAAACCAATATTGGACCAAGGGGCTCAACTTTAAGTGGAGGTCAGAGGCAAAGGATGGCTATTGCAAGGGCTTTCTATCAAAATTCTTCTATATTAATTCTGGATGAGGCAACTTCGTCCTTGGATAGTAAATCTGAGTTATTAGTGCGTCAAGCTGTTGAGCGTTTGATGCAAAATCGCACAGTGCTTGTGATTTCCCATCGCTTGGAAACAGTTATGATGGCTGAACGAATATTTCTTTTGGATAATGGGACGCTTAAAGAGCTGCCTCGATCAACTATGTTGGACGGTCACAAGGATTCATTGCTATCATCTGGGCTTGTTATTTGAATATTTCCTGCAATTGCAAGGGCGATATGTATATATAGTTTCATATAAATGGATTCTATTAATATATTTCTGGTAATGGGGATGTGTTAATCTATTTTACAAGAATGCATCCTCCTCTTTCCTTTCCCTGTACATTCTTTTGTAACCACACATTTATTTTTATTACAGGTCATAATATTTTAATTCATGCTCC 754 0.374 MPGGCIMIDNHNIQNIRLASLRRHISVVSQDITLFSGTVAENIGYRDLTTKIDMERVMHAAQTANADEFIKKLPEGYKTNIGPRGSTLSGGQRQRMAIARAFYQNSSILILDEATSSLDSKSELLVRQAVERLMQNRTVLVISHRLETVMMAERIFLLDNGTLKELPRSTMLDGHKDSLLSSGLVI 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02513 186 ProSitePatterns ABC transporters family signature. 88 102 IPR017871 GO:0005524|GO:0016887
Pste4g02513 186 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 3 165 IPR039421 -
Pste4g02513 186 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 185 IPR003439 GO:0005524
Pste4g02513 186 Gene3D - 4 165 IPR027417 -
Pste4g02513 186 Pfam ABC transporter 4 116 IPR003439 GO:0005524
Pste4g02513 186 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 166 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02513 Pste-Chr4 17711788 17713795 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02513 4 183 Calmodulin-binding Proteins AT2G36910 43.956 2.81e-42 149