Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02512 ATGATGATGCAAATGTTACTCATAAGTCCTACCCTTTCTTTGATTTCAGCCATGATTGTTCCTTGCATGGTGCTAGCTGTTGTCATTCTTGGTCAAGAACTGCGCAAGATATCCAAAGAGGCACATGTTAGCATTGCCGCTCTCTCTTCTTATCTAAATGAGATGCTTCCTGCAATTCTCTTTGTGAAAGCAAACAATGCAGAGTCGTGTGAGAATAGCAAGTTTAAGAGACTGGCTCTGATAGACTATTCTGCAAAGCTGAAGAAGAAAAAGATGAAAGCATTGATTCCTCAGATAATACAAGCTATTTATTTTGGAGTCCTTTCTATACTTTTTGCTGGTTCTATGATGATTTCAAGAGGTTCATTTGATCGCTACAGCTTGGTTTCATTTGTGACATCATTACTTTTCTTGATTCAGCCAATTCAGGATGTAGGAAAAGCTTACAATGAATGGAGACAGGGAGAACCAGCTGCTGAACGTTTGCTTGCTATGACCAGTTTCAAAAATAAGGTGGTTGAGAAACCAGACGCTGCTGCTTTGAACAGTGTTACAGGGGACCTGAAATTCTGTGATGTCTCCTTTGGGTATAATGATGACATGCCACATTTTTTAAATGGATTAAATCTTCACATTAGAACTGGAGAGATAGTCGCTATTGTGGGTCCTTCTGGTGGAGGGAAAACAACACTTATAAAACTGTTGCTTCGGCTTTATGATCCTAAATCTGGTGAGTCATTCAAAATAAATCTCAGCATGAGGATGGTGATTTATTAA 777 0.39 MMMQMLLISPTLSLISAMIVPCMVLAVVILGQELRKISKEAHVSIAALSSYLNEMLPAILFVKANNAESCENSKFKRLALIDYSAKLKKKKMKALIPQIIQAIYFGVLSILFAGSMMISRGSFDRYSLVSFVTSLLFLIQPIQDVGKAYNEWRQGEPAAERLLAMTSFKNKVVEKPDAAALNSVTGDLKFCDVSFGYNDDMPHFLNGLNLHIRTGEIVAIVGPSGGGKTTLIKLLLRLYDPKSGESFKINLSMRMVIY 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02512 258 SUPERFAMILY ABC transporter transmembrane region 4 166 IPR036640 GO:0005524|GO:0016020
Pste4g02512 258 Gene3D ABC transporter type 1, transmembrane domain 1 166 IPR036640 GO:0005524|GO:0016020
Pste4g02512 258 Pfam ABC transporter 205 245 IPR003439 GO:0005524
Pste4g02512 258 Gene3D - 167 253 IPR027417 -
Pste4g02512 258 Pfam ABC transporter transmembrane region 5 141 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste4g02512 258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 245 IPR027417 -
Pste4g02512 258 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 4 245 IPR039421 -
Pste4g02512 258 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 154 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02512 Pste-Chr4 17710464 17711720 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02512 181 245 Calmodulin-binding Proteins AT2G36910 43.284 7.25e-09 54.3