Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste4g02501 | AAACTAGGTGGTTGAATCCTCGGAAAAGGTTTTGTCTGATAAAGCTTTGATCTTTGCACATTGCCCATGGCCTCCAAAGTTCCCCACCCAGATTCAATAGATGCTTTGAAGTCTAAAATGTCTGTTCAAAAGGATCCGGATAAGTTCTTCATGTCCATCAGTGAAGGAGACAAAAAGCCATTTGACTTTTTACGTGTTCTGTATCATGGTTGCATTGCTGGAGGTGCTGCTGGTGTTGTTGTAGAAACAGCTTTATACCCCATCGATACCATCAAAACTCGACTACAGGTTGCTCGTGGCGGAGGGAAAATTGTTTTAAAGGGTTTGTACTCTGGATTGTCTGGAAATCTTGTTGGTGTCTTACCAGCTTCAGCAATTTTTATTGGTGTATATGAACCCACTAAGCAGCAATTGCTAAAGTCATTGCCTGAGAATCTCAGTGCTGTGGCTCATTTTGCTGCAGGTGCTATTGGAGGCATTGCTTCTTCTCTTGTTCGTGTTCCAACTGAGCTTTTCTTCTTTGGTCTCCAAATATTTTCTGCTTTGTTGAACTTGGAATATGTTGTTAAGCAAAGGATGCAGATTGGGCAATATAGATCAGCCCCAGATGCTGTTCGTCTTATTGTTGCTAATGAGGGTTTTAAAGGTCTTTTTGCGGGATATGGATCTTTCTTATTACGAGATTTGCCATTTGATGCTATAGAATTATGCATTTATGAGCAGCTCCGTATTGGGTATAAATTAGCGGCAAAAAGAGATCCTAATGATCCAGAGAATGCTATGCTTGGGGCAGTGGCTGGTGCCATAACTGGAGCAGTTACAACTCCTCTTGATGTAGTAAAAACCAGATTGATGGTTCAGGGATCACAAAACCATTACAAAGGAATCAGTGATTGTGTTAGGACAATAGTTAAAGAAGAAGGAACACATGCTCTTTTTAAGGGTATTGGGCCTAGAGTTTTGTGGATAGGAGTTGGAGGTTCAATATTTTTTTGTGTTCTTGAGAAGACAAAGCAAATTCTTGCTCAGAGGCGGCACCCCAAAGCTGAGACTCAGAAGTGAGTTTCTTCTAGGCAGGATTAAGCTAATGATGTTGCAAATCGCAATGCACATTTTATATAATTCCATGATTGCGTTGAGCCAAATTTTGTCCTGCTTCTTCCTCTTGCCGGGCCTGAAAGGGATCCAGTTCAAGACAAGCCGCGAAAGGCCCTGACATGCAAGCCTCAATTGAAATTTGGGCTGTCACAAATGTAAATTTATTCACTTTTGCTT | 1275 | 0.4133 | MASKVPHPDSIDALKSKMSVQKDPDKFFMSISEGDKKPFDFLRVLYHGCIAGGAAGVVVETALYPIDTIKTRLQVARGGGKIVLKGLYSGLSGNLVGVLPASAIFIGVYEPTKQQLLKSLPENLSAVAHFAAGAIGGIASSLVRVPTELFFFGLQIFSALLNLEYVVKQRMQIGQYRSAPDAVRLIVANEGFKGLFAGYGSFLLRDLPFDAIELCIYEQLRIGYKLAAKRDPNDPENAMLGAVAGAITGAVTTPLDVVKTRLMVQGSQNHYKGISDCVRTIVKEEGTHALFKGIGPRVLWIGVGGSIFFCVLEKTKQILAQRRHPKAETQK | 331 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste4g02501 | 331 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 42 | 115 | IPR018108 | - | |
| Pste4g02501 | 331 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 124 | 223 | IPR018108 | - | |
| Pste4g02501 | 331 | FunFam | S-adenosylmethionine carrier 1 chloroplastic/mitochondrial | 47 | 331 | - | - | |
| Pste4g02501 | 331 | Gene3D | Mitochondrial carrier domain | 44 | 330 | IPR023395 | - | |
| Pste4g02501 | 331 | Pfam | Mitochondrial carrier protein | 236 | 321 | IPR018108 | - | |
| Pste4g02501 | 331 | Pfam | Mitochondrial carrier protein | 124 | 221 | IPR018108 | - | |
| Pste4g02501 | 331 | Pfam | Mitochondrial carrier protein | 47 | 79 | IPR018108 | - | |
| Pste4g02501 | 331 | PANTHER | S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN | 29 | 329 | - | - | |
| Pste4g02501 | 331 | PRINTS | Mitochondrial carrier protein signature | 61 | 75 | IPR002067 | GO:0055085 | |
| Pste4g02501 | 331 | PRINTS | Mitochondrial carrier protein signature | 48 | 61 | IPR002067 | GO:0055085 | |
| Pste4g02501 | 331 | PRINTS | Mitochondrial carrier protein signature | 241 | 263 | IPR002067 | GO:0055085 | |
| Pste4g02501 | 331 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 236 | 318 | IPR018108 | - | |
| Pste4g02501 | 331 | SUPERFAMILY | Mitochondrial carrier | 48 | 313 | IPR023395 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste4g02501 | Pste-Chr4 | 17649055 | 17677230 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste4g02501 | 166 | 321 | Chloroplast and Mitochondria Gene Families | AT2G30160 | 29.268 | 1.80e-10 | 59.3 |