Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02492 GCTGTGTCCACTACTCAATATCCAATTATCCTTTTTTACTTATTTTAAATTCCTCAAGTTTCATAAACAAAAAAAAAAAAGATGGCGGAATCGGAGACGGGGACGCCGACGGCTGCCTCGGTGCCGCCCACCCCGGATACCCCGGGAGGACCGTTATTCACGTCGCTGCGAGTCGACTCACTGTCACACGAGCGTGACTCGTTTGCGATGGCTCGGTGCAAGTGTTTGCCGACCAAGGGCCATACCTGCTTCACTGATTTCTCTGTTGGTGGTGTTCCCCTTCCCAATGTTTCTCTCTCCCAAAAGGTGGGAGCAGAGTTTGTGGGAACGTTCATATTGATATTTGCTGCAACGGCAGGACCGATAGTGAACAACAAGTACAACGGAGTGGAGACTCTGATGGGAAATGCAGCTTGTGCGGGGTTAACAGTGATGTTCATTATTCTGTCAATTGGGCACATCTCAGGTGCACACTTAAACCCATCCCTCACCATTGCCTTTGCTGCATTTCGACACTTTCCATGGACCCAGGTCCCCGCCTACATTGCTGCCCAAGTTTCTGCCTCCATCTGTGCCTGTTTTGCTCTCAAAGGTGTTTATCACCCTTTCCTCTCTGGTGGGGTCACTGTTCCTTCTGACATCACCCTTGCCCAAGCCTTTGCAACTGAGTTCATCATCACTTTTAATCTCTTATTTGTCGTCACTGCTGTCGCTACTGACACTCGTGCGGTTGGTGAATTGGCAGGTATTGCTGTTGGGGCCACAGTCTTACTCAACATTCTCATATCAGGGCCCACAAGTGGTGGTTCGATGAATCCAGTGCGCACGTTGGGTCCAGCAGTTGCAGCAGGAAATTACAAGCACATATGGATCTATATGGTGGCACCAACGCTGGGTGCTCTCGCCGGTGCTGGCGTTTACACGCTCGTCAAGTTGCGTGACAACGACGCTGAGGCCCAACCCCCCCGCCAGGTTAGGAGTTTCCGTCGCTAATTTCCCAACGCTACTTCTTCTTCGCTTTCTCCACCCTCACAACCTATGTTTCATTTTATACGTAGAATTAAATAAAACGTGGGGGGATTCCACTCTCTGTATGGTGTGTTTCACTTTGTGCTATCATGGAAACAAAGTAGTTTGCCTTGTCAGTGTACATTTTCTTATAGGGCTATTAACTAGACCCATGATTTGTATTATCAACATTTCTGCTCCTGTGTAATGTATTATTAATAATACCTATGGTTGTG 1244 0.4823 MAESETGTPTAASVPPTPDTPGGPLFTSLRVDSLSHERDSFAMARCKCLPTKGHTCFTDFSVGGVPLPNVSLSQKVGAEFVGTFILIFAATAGPIVNNKYNGVETLMGNAACAGLTVMFIILSIGHISGAHLNPSLTIAFAAFRHFPWTQVPAYIAAQVSASICACFALKGVYHPFLSGGVTVPSDITLAQAFATEFIITFNLLFVVTAVATDTRAVGELAGIAVGATVLLNILISGPTSGGSMNPVRTLGPAVAAGNYKHIWIYMVAPTLGALAGAGVYTLVKLRDNDAEAQPPRQVRSFRR 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02492 303 PRINTS Major intrinsic protein family signature 113 137 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste4g02492 303 PRINTS Major intrinsic protein family signature 263 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste4g02492 303 PRINTS Major intrinsic protein family signature 226 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste4g02492 303 PRINTS Major intrinsic protein family signature 195 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste4g02492 303 PRINTS Major intrinsic protein family signature 150 169 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste4g02492 303 PRINTS Major intrinsic protein family signature 74 93 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste4g02492 303 SUPERFAMILY Aquaporin-like 71 290 IPR023271 -
Pste4g02492 303 MobiDBLite consensus disorder prediction 1 27 - -
Pste4g02492 303 ProSitePatterns MIP family signature. 131 139 IPR022357 -
Pste4g02492 303 Gene3D Glycerol uptake facilitator protein. 67 294 IPR023271 -
Pste4g02492 303 Pfam Major intrinsic protein 70 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste4g02492 303 PANTHER AQUAPORIN NIP2-1 58 288 IPR034294 -
Pste4g02492 303 FunFam Aquaporin NIP2-1 63 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02492 Pste-Chr4 17612233 17618327 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02492 25 303 Major Intrinsic Protein MIP AT4G10380 73.684 3.50e-145 409