Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02460 GATGAGATTTCAAGCCCAATTAGTGCTCGAATTTTCGAACTTTGTGACCCTGATTTCTTCCCAGACACACTGCAACATTCTGAGGTTACCTCCAGCTCAAATTGTTGCCATGAAGAGAAGTCCTCATATGCCACAACCATATCACCACCTTTAGAAGTAGTTGACAACAATAAGATCAATATTAATAGCAATAGCAACATAGTCACCACTTCATCTAGTACTACCACAACTAGCACCACGACGAACAACAACAACAACAACGCAACAAACAGCAATAACCTTTCTATCTTCTTTGATTCTCAAGAAGAAATTGATAATGACATTTCAGCCTCCATAGACTTCTCATCATCTCCATCTTTTATTGTTCCACCACTTCTCCCAATCACAACTCAGCAGGATCAGTTTGATTTCTCTTCAGCTCAGCCACATGTGCAACTATCAGCAGCAGGTTCAGTTTTGAAAGGCTTCTCTCAGTACCCCACTGAACCTATGTTTGCACCCCTTATTGGGGGGTCTCCATTACCATCTATTTTTTATGATGATTGCATATCCTCACTCCCTTCTTATATGCCTCTCAACCCTTCATCTCCCTCTTGCTCTTATCTCAGTCCTGGCTTAGGAATTTACATGCCTCCTCCTGGTTCTCTTAACACTGCCGTATCTGCTGACAGTTGTGGAGTTTTTGGTGGGAACATTTTATTGGGGTCTGAACTGCAGGCACAAGAACTTGACTATCAGGGAGAAAATGGTGGAATATATTGTACAGATTCAATTCAGAGGGTGTTCAACCCCCCAGACCTTCAGGCACTAGGTACTGAGAGTCAGAAACTTGTAGCTGGGGCTGGAAGTTCTGCCACTTTGGCACCAGAAATCTCACACTTGGAGGACTCTAACTTGAAGGTTGGAAAACTCTCTGTTGAGCAGAGGAAGGAAAAGATTCATAGATACATGAAGAAGAGAAATGAAAGAAATTTCAGCAAGAAAATCAAGTATGCTTGCCGCAAAACTTTGGCAGATAGCAGGCCCCGGGTTAGAGGAAGGTTTGCAAAGAATGATGACTTTGGAGAGAGCCATAGACAAGGAAGTAGCAATCATGAAGAAGATGATGAAGAAATAATTGTGAAAGAAGATGATATGGTTGATTCCTCAGATATCTTTGCACATATCAGTGGGTTGAATTCTTTCAAATGCAACTATTCCATCCAATCCTTGATTTGAAATAATTAATAGTTTGACTAGTTAATATTAAAGCTTATCTATATTTAGCTTCTGTAGATTAATTTTGAGAGTACTCTTTCCCATCCCGGTTCTCTACAATCCGGGTTTGTTGGTTTGAGGAAACTGAATAATTGGGGTCCAAATAAATATACCAATAAGTGAAGTAAGTTAGGAACATACAGAAATTGGAAACTGTATACATTTTTGCAGATATTGTCTTTTTCATTCAGTTGTAACCAAGGGACATTCCAGTTGCCACCAACCAAGACTAATGTAATGTAACACATTCTTGTAGCTTCTTTTATAATATTTAGGATCTTGCTTTAAAGTAACTTTACATGGGCTAATTATTTATAAAGAGGGATTAAATTGATGTA 1595 0.3918 DEISSPISARIFELCDPDFFPDTLQHSEVTSSSNCCHEEKSSYATTISPPLEVVDNNKININSNSNIVTTSSSTTTTSTTTNNNNNNATNSNNLSIFFDSQEEIDNDISASIDFSSSPSFIVPPLLPITTQQDQFDFSSAQPHVQLSAAGSVLKGFSQYPTEPMFAPLIGGSPLPSIFYDDCISSLPSYMPLNPSSPSCSYLSPGLGIYMPPPGSLNTAVSADSCGVFGGNILLGSELQAQELDYQGENGGIYCTDSIQRVFNPPDLQALGTESQKLVAGAGSSATLAPEISHLEDSNLKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGESHRQGSSNHEEDDEEIIVKEDDMVDSSDIFAHISGLNSFKCNYSIQSLI 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02460 405 MobiDBLite consensus disorder prediction 70 91 - -
Pste4g02460 405 MobiDBLite consensus disorder prediction 345 372 - -
Pste4g02460 405 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 97 367 IPR045281 GO:0009909
Pste4g02460 405 ProSiteProfiles CCT domain profile. 309 351 IPR010402 GO:0005515
Pste4g02460 405 MobiDBLite consensus disorder prediction 345 369 - -
Pste4g02460 405 Pfam CCT motif 309 351 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02460 Pste-Chr4 17483060 17485664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02460 309 367 C2C2-CO-like Transcription Factor Family AT5G57660 46.875 1.09e-11 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste4g02460 CCT 5.3e-19 CL0281