Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02424 TCCGTGATTGGAAAGTTTCGACTAACTTTTATATTCCACGAATGTGAAGCTTTGAAAAGTCAACTTTTTGTGGTTCTCCCCAGCAGTAGGAAAGCGCACAGAATTGGACTTCCCATTCCGAAATGCCTCAAAAGTAGTCGTTTGCAGAAGCAAAGTAGCATGTCGACGCTGCCAGAGTGTTCGGTGGCGCAACTGGCCCAACTGCTGGGGCCAAACACGACGGACGCGGGAGGAGCGGCGTCCCTGATATGCGAGCAGTTATCGGCGGTGGGAAGGAAATTGGTGGACACGGCGTACGCGGTGGACAACACGTACCTTCTATTCTCGGCGTACCTGGTGTTCTCGATGCAGCTGGGGTTCGCGATGCTGTGCGCGGGGTCGGTACGGGCGAAGAACACGATGAACATCATGCTGACGAACGTGCTGGACGCGGCGGCGGGAGGGCTGTTCTACTACCTATTCGGGTTCGCCTTCGCCTTTGGAAGCCCGTCGAACGGCTTCATAGGAAAACACATGTTCGGGCTCAAAGACCTTCCAACGCCCTCATTCGACTACAGCAACTTCCTCTACCAATGGGCATTCGCAATCGCCGCAGCAGGCATCACCAGCGGCTCCATCGCCGAAAGAACCCAATTCGTGGCCTACCTCATATACTCCTCATTTCTCACGGGCTTCGTTTACCCGGTCGTCTCCCACTGGTTCTGGTCCTCCGACGGCTGGGCATCCCCAACAAACACCGACCTCTTGTTCTCCACCGGAGTCATCGACTTCGCTGGCTCCGGTGTTGTCCACATGGTCGGCGGAGTCGCCGGCCTATGGGGCGCCTTCATCGAAGGCCCTAGAATCGGACGCTTCGACCACGCAGGCCGGGCTGTCGCCTTGCGTGGTCACAGTGCCTCCTTAGTTGTTCTCGGCACTTTCATGCTCTGGTTCGGTTGGTACGGTTTTAACCCTGGCTCCTTCAATAAAATCCTTGTTACCTACTCTGCCTCCGGAAGTTACTACGGTCAATGGAGCGCCGTTGGTAGAACCGCCGTTACCACAACACTCGCCGGCTCAACGGCCGCCTTGACCACTCTCTTCGGCAAGCGCCTTCTATCCGGTCACTGGAACGTTACCGATGTTTGCAACGGTTTGTTAGGAGGCTTTGCCGCCATAACCGCCGGTTGCTCCGTCGTTGAGCCCTGGGCTGCTATCGTCTGCGGTTTTGTCGCCTCCTTGGTTTTGATCGGCTGTAACAAACTCGCCGAGAAGTTCAAATTCGACGATCCTCTAGAGGCGGCGCAGTTACACGGCGGGTGTGGCGCGTGGGGGGTTTTGTTCACAGCACTCTTTGCAAAGGGAGATTATGTCAATCAGGTTTATCCAGGGAAACCTAGCAGGCCTCACGGCTTGTTCATGGGTGGTGGCTGGAGCTTGTTGGCCGCGCACGTCATTCAGATTTTGGTTATTGCCGGCTGGGTGAGTGCCACCATGGGACCCTTGTTTTGGTGCTTGAACAAATTGAAACTTTTAAGGATTTCCGCAGAGGACGAACTTGCGGGTATGGATCTCACTCGACATGGTGGCTTTGCTTATGCTTATGAAGATGAGGACGCACACAAGCACGGGATTCAGCTCAGGAAGGTCGAGCCAAACGTTTCTTCTACTCCCAACACCGAT 1662 0.5517 SVIGKFRLTFIFHECEALKSQLFVVLPSSRKAHRIGLPIPKCLKSSRLQKQSSMSTLPECSVAQLAQLLGPNTTDAGGAASLICEQLSAVGRKLVDTAYAVDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGSPSNGFIGKHMFGLKDLPTPSFDYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSSDGWASPTNTDLLFSTGVIDFAGSGVVHMVGGVAGLWGAFIEGPRIGRFDHAGRAVALRGHSASLVVLGTFMLWFGWYGFNPGSFNKILVTYSASGSYYGQWSAVGRTAVTTTLAGSTAALTTLFGKRLLSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVASLVLIGCNKLAEKFKFDDPLEAAQLHGGCGAWGVLFTALFAKGDYVNQVYPGKPSRPHGLFMGGGWSLLAAHVIQILVIAGWVSATMGPLFWCLNKLKLLRISAEDELAGMDLTRHGGFAYAYEDEDAHKHGIQLRKVEPNVSSTPNTD 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02424 554 Gene3D Ammonium transporter AmtB like domains 83 544 IPR029020 -
Pste4g02424 554 FunFam Ammonium transporter 83 540 - -
Pste4g02424 554 Pfam Ammonium Transporter Family 105 526 IPR024041 GO:0008519|GO:0016020|GO:0072488
Pste4g02424 554 ProSitePatterns Ammonium transporters signature. 256 281 IPR018047 GO:0008519|GO:0016020|GO:0072488
Pste4g02424 554 NCBIfam ammonium transporter 102 526 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pste4g02424 554 PANTHER AMMONIUM TRANSPORTER 81 522 - -
Pste4g02424 554 SUPERFAMILY Ammonium transporter 99 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02424 Pste-Chr4 17260243 17261939 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02424 59 549 Inorganic Solute Cotransporters AT4G13510 82.150 0.0 822