Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02417 ATAGCAGGAACACTAAACTTGCTTGCTAACCCAGTCTTACTCATCCTAACTGCACTTCTTTCCATTGGGCTTCTGGCATGGGCCTTCCCAAGAGGAGGAGGTGTAGCATGGAGAAACGGGAGGAACCAAATGGGCCAGGTCCCTATTCCAGGGCCCAAAGGGGTCCCACTCTTCGGCCTCTTATTTAGCCTGAACCATGGCCTACCTCACCGCACTCTCGCCTCTATTGCTTCCACTCTAACCGCCACAAAACTCATGGCCTTCAGTTTGGGGTCAACCCCAGCAGTTATAACCTCAAACGCTGACGTGGCGCGTGAAATCTTAAACTCACCCTATTTCGCTGACCGTCCAATTAAACAATCTGCTAAGAGCCTCATGTTCAACCGCGCTATTGGGTTTGCACCAAGCGGCGCGTATTGGCGCTTGCTGCGTAGGGTAGCCTCAACCCACCTTTTCTCCCCGCGGCGCATTCTAGCCCACGAGCCCCGTCGCTTGCTAGACTGTGCCGCCATGTTGCGTGCCGTAACTCACCAACAGTCCAACCTCGGCTTCGTGTGCCTAAGACAACACCTTCAAGATGCGGCACTTAACAACGTTATGAGCACTGTTTTTGGAAGAAGATACAAGCATGATGAGTGCTATAATAGCTGTGCCTGTGAGGTTAAAGAGGTGCGTCACATGGTGAGGGAAGGGTTTGAGATCTTGGGAGCTTTCAACTGGTCTGATTATGTTCCTTGGATCAGCTTCTTTTATGACCCTTTGCGTATTCGAGAGCGCTGCTCGGTTCTTGCGCCCAGAGTTCAGAAATTTGTGAAGCAGGTTTTGGAGGAGCACCGAATGAGTCCGCTCAAGGAGGTTTCTGATGACTCCGACTTTGTGGATGTGCTACTGTCCCTTGAGGGAGATGAAAGGCTCCAAGATGAAGATATTATTGCTGTTTTATGGGAGATGATATTTCGTGGCACAGATACAACAGCACTTCTTACTGAGTGGGTAATGGCAGAGCTGGTTTTGAACCAACAAGTGCAAAGTAGGCTTCGAGAAGAGCTTGACAGGGTTGTGGGAAACAAAAGGGTAGTTACAAATGGTGATGTGATGAAGGTGCCATACCTAGAAGCCATTGTGAAGGAAACTTTGCGACTGCATCCAATTGGGCCCCTTCTTTCCTGGGCCCGTTTGTCCACGTCAGATGTCCAGCTCAGCAATGGAATGGTGGTCCCCGCCAACACCACAACAATGGTGAACATGTGGGCCATAACCCACGACCCCAGTGTGTGGGAGGAGCCGCTGGTGTTCAAGCCAGAGAGGTTTGTCAAGACTGAAGGAGGGGTTGAAGTGGATGTTAGAGGTGTTGACCTTAGGCTTGCACCATTTGGCGCTGGACGTAGGGTTTGCCCTGGCAAGAACCTTGGCCTTGTCTCTGTGAGCCTTTGGGTGGCTAACTTGGTTCATCACTTTCAATGGCTCCAAGACATGGCTAACCCACTTGACCTAACCGAGGTGCTCAAGCTATCTTGTGAGATGAAGAATCCCCTCAAAGCTGTTGCTTTTCCTAGGTTTATT 1563 0.5061 IAGTLNLLANPVLLILTALLSIGLLAWAFPRGGGVAWRNGRNQMGQVPIPGPKGVPLFGLLFSLNHGLPHRTLASIASTLTATKLMAFSLGSTPAVITSNADVAREILNSPYFADRPIKQSAKSLMFNRAIGFAPSGAYWRLLRRVASTHLFSPRRILAHEPRRLLDCAAMLRAVTHQQSNLGFVCLRQHLQDAALNNVMSTVFGRRYKHDECYNSCACEVKEVRHMVREGFEILGAFNWSDYVPWISFFYDPLRIRERCSVLAPRVQKFVKQVLEEHRMSPLKEVSDDSDFVDVLLSLEGDERLQDEDIIAVLWEMIFRGTDTTALLTEWVMAELVLNQQVQSRLREELDRVVGNKRVVTNGDVMKVPYLEAIVKETLRLHPIGPLLSWARLSTSDVQLSNGMVVPANTTTMVNMWAITHDPSVWEEPLVFKPERFVKTEGGVEVDVRGVDLRLAPFGAGRRVCPGKNLGLVSVSLWVANLVHHFQWLQDMANPLDLTEVLKLSCEMKNPLKAVAFPRFI 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02417 521 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g02417 521 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g02417 521 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g02417 521 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g02417 521 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g02417 521 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g02417 521 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g02417 521 FunFam Cytochrome P450 78A5 41 519 - -
Pste4g02417 521 CDD CYP78 82 512 - -
Pste4g02417 521 Gene3D Cytochrome P450 37 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g02417 521 Pfam Cytochrome P450 50 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g02417 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Pste4g02417 521 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g02417 521 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g02417 521 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g02417 521 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g02417 521 PANTHER CYTOCHROME P450 78A7-RELATED 12 519 - -
Pste4g02417 521 SUPERFAMILY Cytochrome P450 49 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02417 Pste-Chr4 17200738 17203364 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02417 15 520 Cytochrome P450 AT5G09970 62.598 0.0 672