Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02407 ATGCTACTGTCGCGTGTGGAACAAAGTAAGCCTCTTCTGAAAACATTATCTCCAGTGGAGTTCGAGTGCAAAACGTGCAAACGCAAGTTCTCATCTTTCCAGGCCCTTGGAGGCCACAGGGCTAGCCACAAGAAACCAAAGTTGGAAGGAGAAGAAAAAGTGAAAGAAGAGGGGAAGGAACCCAAAATGCATCAGTGTTCCATTTGTGGAATGGAGTTCTCTTTGGGTCAGGCACTGGGGGGTCACATGAGAAAACACAGACCTCCCATTAATGACAATAATCAACAGTTTCATTCAATAAACCAAGCTATTGCCAAAGCACCTGTTCTGAAACGATCAAATAGCAAGAGGGTCACTTGCTTGAAGTTGGACCTCAATTTGACGCCTTTGGAAAATGACCTCAAGTTCTTGTTCGGAAACAACCCACCCACACTCCATCTTTCTTACTAG 450 0.4489 MLLSRVEQSKPLLKTLSPVEFECKTCKRKFSSFQALGGHRASHKKPKLEGEEKVKEEGKEPKMHQCSICGMEFSLGQALGGHMRKHRPPINDNNQQFHSINQAIAKAPVLKRSNSKRVTCLKLDLNLTPLENDLKFLFGNNPPTLHLSY 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02407 149 PANTHER ZINC FINGER PROTEIN ZAT5 20 133 - -
Pste4g02407 149 MobiDBLite consensus disorder prediction 37 63 - -
Pste4g02407 149 ProSitePatterns Zinc finger C2H2 type domain signature. 23 43 IPR013087 -
Pste4g02407 149 Pfam C2H2-type zinc finger 64 88 - -
Pste4g02407 149 Pfam C2H2-type zinc finger 21 46 - -
Pste4g02407 149 ProSitePatterns Zinc finger C2H2 type domain signature. 66 86 IPR013087 -
Pste4g02407 149 ProSiteProfiles Zinc finger C2H2 type domain profile. 64 86 IPR013087 -
Pste4g02407 149 Gene3D Classic Zinc Finger 19 86 - -
Pste4g02407 149 ProSiteProfiles Zinc finger C2H2 type domain profile. 21 48 IPR013087 -
Pste4g02407 149 MobiDBLite consensus disorder prediction 42 63 - -
Pste4g02407 149 SUPERFAMILY beta-beta-alpha zinc fingers 21 86 IPR036236 -
Pste4g02407 149 SMART c2h2final6 64 86 IPR013087 -
Pste4g02407 149 SMART c2h2final6 21 43 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02407 Pste-Chr4 17137817 17138266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02407 21 149 C2H2 Transcription Factor Family AT3G53600 55.303 3.38e-40 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste4g02407 zf-C2H2_6 2.3e-08 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01677 5 10633328 10633795 Pste4g02407 4 17137817 17138266 PCT