Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02388 GAGAGCCCATAAGCCCAAGCCTTCCTGGGCCACCAGTCCTCCTACAATGTGTAAAAAGCAAGAGCCCAACGCAATCCTGGTAGTGGTTAGTGGAATAAATAAGGAGAAGGGTTTGGGATTGGTTGCAGAGCTGCGCGTGGATCTGAAAATGGCGAGGATAAAGGTGTACGAGCTGAGGAACAAGACGAAGGCGGAGCTGGTGAGCCAGCTGAAGGATCTGAAGGCGGAGCTGGCCCTGCTGCGAGTGGCGAAGGTGACCGGCGGCGCCCCCAACAAGCTGTCGAAAATCAAGGTGGTGAGGCTTTCGATAGCGCAGGTATTGACGGTTATTTCCCAGAAACAGAAAGCGGCACTGAGAGAGGCTTACAAGAATAAAGAGTATTTGCCCCTTGATCTCCGTCCCAAGAAGACCCGCGCCATTCGCAGACGCCTTACCAAACACCAGGCATCATTGAAGACAGAGCGGGAGAAGAAGAAGCAGCTGTACTTTCCATTGAGAAAGTATGCGATCAAAATACCTGCCACTGCCAGCATCCCAATTTTTAAGTTTCCTATGTCTATGCGAAAACTAGAGTTGTTTTGGGAAATTATGGTTGTTTATGTCCTTTTGCTTTATAGCATAACATCAATGACAGTATCCTTTTTGAGTTGTGGTAGTGGATATTCAATTGACCATCTCCCCTTCTCTCATTTT 694 0.4841 MCKKQEPNAILVVVSGINKEKGLGLVAELRVDLKMARIKVYELRNKTKAELVSQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKEYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKQLYFPLRKYAIKIPATASIPIFKFPMSMRKLELFWEIMVVYVLLLYSITSMTVSFLSCGSGYSIDHLPFSHF 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02388 216 Gene3D - 35 111 IPR036049 GO:0003735|GO:0005840|GO:0006412
Pste4g02388 216 FunFam 60S ribosomal protein L35 112 157 - -
Pste4g02388 216 PANTHER 60S RIBOSOMAL PROTEIN L35 35 156 IPR045059 GO:0000463|GO:0022625
Pste4g02388 216 Pfam Ribosomal L29 protein 42 98 IPR001854 GO:0003735|GO:0005840|GO:0006412
Pste4g02388 216 CDD Ribosomal_L29_HIP 42 98 - -
Pste4g02388 216 Hamap 50S ribosomal protein L29 [rpmC]. 38 98 IPR001854 GO:0003735|GO:0005840|GO:0006412
Pste4g02388 216 FunFam 60S ribosomal protein L35 35 111 - -
Pste4g02388 216 NCBIfam 50S ribosomal protein L29 42 98 IPR001854 GO:0003735|GO:0005840|GO:0006412
Pste4g02388 216 Coils Coil 48 68 - -
Pste4g02388 216 Gene3D - 112 156 - -
Pste4g02388 216 SUPERFAMILY Ribosomal protein L29 (L29p) 38 99 IPR036049 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02388 Pste-Chr4 17026963 17028621 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02388 35 157 Cytoplasmic Ribosomal Protein Gene Family AT2G39390 86.992 5.34e-71 210