Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02365 GTGGTTGGAAGTCAGACACACGTGCGTGGTAAAGTATTTGAAGCACGCTTCTCACACAATCCAGCTGGGAGCCATGGTGGTGGCGCAACATGCCACACAAGTCCCATCAGCTTCCCCACTAATACTCTTGAGAGCCTCAGCCACCAGCCACCATATAAAAGAACAACCTCATCTGAGAGTCTTAAAATGCAGAAAAGAAAGGCTGGGAGGAAGAAGTTCCACGAGACACGTCACCCGGTGTACAAAGGTGTGAGGAAGAGAAAGGGGAAGTGGGTGTGCGAGCTGCGACAACCTAACAACAAGAACACGCGCGTGTGGCTCGGAACATTCCCACACCCCGACATGGCTGCGATAGCCTACGATGTTGCTGCTTTGGCTTTCAAGGGGGACAATGCTTCCTTGAACTTTCCCCACGCTGTTGCCTCATTGCCGCGCCTTAACTCTCTCACGTCTTCCGTTAGGGCCATTCAGTTTGCGGCCACACAGGCGGCGGAGAACCACTTTTCTCAGTTTCCAACGCAGAGGGAGGGTTCTCGAACCTTCTCTTGCCACCAACATTCTTCCGAGGGAACCTTCTTTTGGGATGAAGAAGAGGTCTTTAACATGCCTGAGTTGCTGAACAGCATGGCTGAGGCGTTGATTATTACACCACCCGCTTTGGAAAGAGGCTTCAATTGGCTTGCTGCTGAAACCACTGTAGATTTGACTCTCTGGTCACACTGA 723 0.5173 VVGSQTHVRGKVFEARFSHNPAGSHGGGATCHTSPISFPTNTLESLSHQPPYKRTTSSESLKMQKRKAGRKKFHETRHPVYKGVRKRKGKWVCELRQPNNKNTRVWLGTFPHPDMAAIAYDVAALAFKGDNASLNFPHAVASLPRLNSLTSSVRAIQFAATQAAENHFSQFPTQREGSRTFSCHQHSSEGTFFWDEEEVFNMPELLNSMAEALIITPPALERGFNWLAAETTVDLTLWSH 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02365 240 MobiDBLite consensus disorder prediction 41 72 - -
Pste4g02365 240 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 50 239 IPR045277 GO:0003700
Pste4g02365 240 Gene3D AP2/ERF domain 80 139 IPR036955 GO:0003700|GO:0006355
Pste4g02365 240 Pfam AP2 domain 79 129 IPR001471 GO:0003700|GO:0006355
Pste4g02365 240 SUPERFAMILY DNA-binding domain 80 138 IPR016177 GO:0003677
Pste4g02365 240 SMART rav1_2 80 143 IPR001471 GO:0003700|GO:0006355
Pste4g02365 240 ProSiteProfiles AP2/ERF domain profile. 80 137 IPR001471 GO:0003700|GO:0006355
Pste4g02365 240 CDD AP2 81 139 IPR001471 GO:0003700|GO:0006355
Pste4g02365 240 MobiDBLite consensus disorder prediction 41 58 - -
Pste4g02365 240 PRINTS Ethylene responsive element binding protein signature 119 139 IPR001471 GO:0003700|GO:0006355
Pste4g02365 240 PRINTS Ethylene responsive element binding protein signature 81 92 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02365 Pste-Chr4 16888022 16888799 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02365 37 239 AP2-EREBP Transcription Factor Family AT5G51990 39.189 6.20e-41 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pste4g02365 AP2 1.6e-11 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02365 4 16888022 16888799 Pste4g02365 4 16888022 16888799 ECH