Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02364 ATGTTTTCCGGCATTGCAACCAGCAGCCGAGGCTCCTCTCGCTACCGCGGTGTCCGCCGTAGGAGCAGCGGCAAGTGGGTTTCTGAAATCCGTGAGCCCAAAAAGCCTAACAGAATTTGGTTAGGCACGTTTCCCACGCCGGAAATGGCCGCCGTCGCCTACGACGTCGCTGCCTTGGCTCTTAAGGGCAAGGATGCTGAACTCAACTTTCCTGACTCGGCTTCTTCGCTTCCGGTCCCGGCTTCGCTCTCTGCGCGTGACATTCAGGTGGCTGCAGCCGCGGCTGCAGCGGCTGCTGGAGCAGCCAACGATGCCATGAGGACGCAAACAGGGAATTATAACTTTTCAGTGGGGCAAGAGAATCAAACGGGGACGAGTAACCACCACTATGTGGATGAAGATTTGATCTTTGACATGCCGAATGTTCTGGTGAATATGGCCCAGGGAATGCTGCTTAGTCCTCCTCCTTTTGACCTTGGTGGGGCACCGGGTAGCCCTGAATACACTGAACAAGAAACAAGCCTGTGGAACTTCCCTTGA 540 0.5537 MFSGIATSSRGSSRYRGVRRRSSGKWVSEIREPKKPNRIWLGTFPTPEMAAVAYDVAALALKGKDAELNFPDSASSLPVPASLSARDIQVAAAAAAAAAGAANDAMRTQTGNYNFSVGQENQTGTSNHHYVDEDLIFDMPNVLVNMAQGMLLSPPPFDLGGAPGSPEYTEQETSLWNFP 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02364 179 CDD AP2 13 73 IPR001471 GO:0003700|GO:0006355
Pste4g02364 179 FunFam Ethylene-responsive transcription factor 2 13 72 - -
Pste4g02364 179 MobiDBLite consensus disorder prediction 1 27 - -
Pste4g02364 179 ProSiteProfiles AP2/ERF domain profile. 14 71 IPR001471 GO:0003700|GO:0006355
Pste4g02364 179 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 13 177 IPR045277 GO:0003700
Pste4g02364 179 SMART rav1_2 14 77 IPR001471 GO:0003700|GO:0006355
Pste4g02364 179 SUPERFAMILY DNA-binding domain 13 73 IPR016177 GO:0003677
Pste4g02364 179 PRINTS Ethylene responsive element binding protein signature 15 26 IPR001471 GO:0003700|GO:0006355
Pste4g02364 179 PRINTS Ethylene responsive element binding protein signature 53 73 IPR001471 GO:0003700|GO:0006355
Pste4g02364 179 Gene3D AP2/ERF domain 13 72 IPR036955 GO:0003700|GO:0006355
Pste4g02364 179 Pfam AP2 domain 13 63 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02364 Pste-Chr4 16869626 16870335 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02364 15 179 AP2-EREBP Transcription Factor Family AT2G36450 58.011 4.19e-53 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste4g02364 AP2 3e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02364 4 16869626 16870335 Pste4g02364 4 16869626 16870335 ECH