Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02353 AATCTAATAAAGTTTTCATTATCACGAAAATTAAACCAGGGGAAAAGGATGACGTTAACGTTAACCCAAAAGATTGGAAAGTGGAAGTGTTTATAGAAACATAGTTGTCTAAAAACTTGGGATTATTGCTGAAAAAGATGATGGAACTCAAAATCTCAGCCATGAAATAAAGACGTTTAGAAACCCACTAGGCCACATAAACATTAATTATAAGGGACAAATAAAAGGACAAGAACAGCAATGTCATACTATGCTGTTTATTAAATCTCTCTTCCCCTCCTGATCTTAGATCTCGTCTGACACTACTCTTAAGATCTTCTGCCATAAACCTCCAAACCCTTCTCTTATCCATTGCTCTCTTTGGCCACTGAGATCATAGACCACCTCTGCCATATTGAATCTTTATGTGCTTTTACAGCTAAATTTGTTCCTGAATCATGATGGCATACTTTTGAAGTCCAAACGCATTCACCTAGGATTCAGGTACAAAGTACCTACACGCCTCCATATTTTTTGTACTTGCATGAAAACTATTTGTTTTCACCTTTCAAGGTACATTTCTCACTTGCTTCTTCCCATACCCTTTTTGGCCTCTATCTCAATTTTGTTCTTATCCAATTGTATCTGCTTCTGCACGGTGTATAAATTCAGGAACTGAGGTCGTGTGCTAGCAGCAAAATCAACAAGAACTTGATCTTTGCTCAATTGTGCAGTTGATGTGAAACATATGCTTTTGTCAAATAAAGGGGTTGCCAAATGATGGTTAGATCCTGTTGGAAACCAATTGTTGATGGTGATGAAGGAGATGGGAGTGGGAGAGTTGATGGACTTCTATGGTACAAGGATTTGGGGAACCACCTTTATGGGGAATTCTCAATGGCTGTGGTTCAGGCCAATAGTTCATTAGAGGATCGTGGTGAACTTGAGTCTGGACCCTTGACTTCCAACCACTTGGGTCCTCAAGGGACCTTTATAGGTGTTTATGATGGCCACGGTGGGAGTGAGGCCTCTCAGTTTGTTAGCGACAATCTCTTCTGCAATCTCAAAAGGCTTGCAGCTGACCATCAAGGTGTGTCAGAAAATGTTATCAGAAGGGCATATTCAGCAACAGAGGAGGGTTTTCTGTCTCTTGTGAAGAAACAGTGGCCGAGTAAGCCACAGGTTGCATCCACGGGTACTTGTTGCTTGGTGGGGGTAATTTGCAATGGAATGATATATATTGCAAATTCTGGAGACTCCCGGGTGGTGTTAGGAAGATTTGAGAGAGCAACAAGGGAAGCAGAAGCTATACAGTTATCTACAGAACACAATGTTAACCAAGAAACAGTGAGAGATGAACTTCGGTCCAAGCACCCCTTTGATTCACAAATCGTGGTTTTGAGACAAAATGTTTGGCGTGTGAAAGGCCTCATACAGGTTTCACGATCCATAGGGGATGCATATTTGAAGAAAGCGGAATTTAACAGGGATCCTCTACCAGCCAAGTATAGATTAGCAGAAACATTCTTCAGACCAATTCTTAGTTGTGAGCCATCAACATCATCTCACACAATCCATCCTGATGATCAATTTCTCATATTTGCTTCTGATGGTTTATGGGAGCATCTTACCAACCAAGAGGCAGTTAACATAGTCAGCAACAATCCACCTAACGGAATTGCCAGAAGACTTGTGAAAGCTGCACTTCGAGAAGCAGCTAAGAAGTGCGAAATGAGACTTTCTGACCTCCAAAAGATTGAGCAAGGGATGAGGAGACACATCCATGATGACATAACAGTGATTGTGGTCTTTCTTAATCCCAAACTCACTGAGAATACCTCTCTCTGTGGTTCTCCTCTTTCAATCAAGGGAGGTGGCTCTGCCAATTCCTAGATTGCTACCTCATCATACAAAAGTAACAACAACA 1906 0.4129 MMVRSCWKPIVDGDEGDGSGRVDGLLWYKDLGNHLYGEFSMAVVQANSSLEDRGELESGPLTSNHLGPQGTFIGVYDGHGGSEASQFVSDNLFCNLKRLAADHQGVSENVIRRAYSATEEGFLSLVKKQWPSKPQVASTGTCCLVGVICNGMIYIANSGDSRVVLGRFERATREAEAIQLSTEHNVNQETVRDELRSKHPFDSQIVVLRQNVWRVKGLIQVSRSIGDAYLKKAEFNRDPLPAKYRLAETFFRPILSCEPSTSSHTIHPDDQFLIFASDGLWEHLTNQEAVNIVSNNPPNGIARRLVKAALREAAKKCEMRLSDLQKIEQGMRRHIHDDITVIVVFLNPKLTENTSLCGSPLSIKGGGSANS 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02353 371 SMART PP2C_4 32 344 IPR001932 -
Pste4g02353 371 ProSiteProfiles PPM-type phosphatase domain profile. 35 346 IPR001932 -
Pste4g02353 371 PANTHER PROTEIN PHOSPHATASE 31 344 IPR015655 GO:0004722|GO:0006470
Pste4g02353 371 SUPERFAMILY PP2C-like 65 347 IPR036457 -
Pste4g02353 371 Coils Coil 307 327 - -
Pste4g02353 371 CDD PP2Cc 36 346 IPR001932 -
Pste4g02353 371 ProSitePatterns PPM-type phosphatase domain signature. 72 80 IPR000222 GO:0043169
Pste4g02353 371 FunFam Phosphatase 2C family protein 27 356 - -
Pste4g02353 371 Pfam Protein phosphatase 2C 58 315 IPR001932 -
Pste4g02353 371 Gene3D - 29 355 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02353 Pste-Chr4 16794721 16797243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02353 2 367 PP2C-type Phosphatase Gene Family AT3G12620 63.957 5.00e-178 498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02353 4 16794721 16797243 Pste4g02353 4 16794721 16797243 ECH
Pste5g01777 5 11274075 11277129 Pste4g02353 4 16794721 16797243 PCT