Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02342 AAAAAATCATGAGTCTTTGTCTGAACAAAACCAGCTTTACTCTTCAACTGTTCTTTCCTCTCTTCCCTATCGAATTCCAAGTTTCCAACCCTTCTTCCTCTTTACAGAGACAAGATCAATTTTTTACAAGGCCGCCTCTCCCCTCTCTCTAGTCTACCCCTCGTCTCATTCTTTCCCCTTCTTCATCGCTTGTACGTACTAGAATTAGGGTTTTATCTCTATTATTGTAGCATCATTGTACAATTTAAAATTAGGCCTTTACTTGGATCAATCCTGTACTTTTTCTTCGCTTAACTCCGATTGTTTAGTTTTTATGTAATGAATACAATAAAAGAGGTGCTGTTCTATCTTGTAATCTAGTTTTTTACATTTTTGTCACGCAATTGTATGTAAATTAGGGTTAGGATTTTTTTTTTTATTTGTTTTGGTGTTTGATTGGTGGGCATGGAGAATTCGCGTAGACCGTTTGATCGCTCGCGAGAACCGGGTCCCAAAAAGCCCCGGTTGATGGAAGAGCTGGATCGGGCTCCCAATTCGGGTCCGCGACAGTTTCCTCAGAGACAAGTGGGTTCTGGGATTACGACGTTGTCGTCTGGAAGGCTTAGAACAAATGACAGAGACCTTGAAAGCAGTGATTTTGGTCGCCGGGGCGGTGCCAGCTCCGGTGGAGGCGGTGGCGGTTATCAGCCGCAGCCACTGCCATTTCAAGAGCTTGTTAGTCAGTATAAGGCAGCTCTTGCAGAACTTACGTTTAACTCCAAACCGATAATTACCAACTTGACTATCATTGCAGGGGAGAACCAAGCTGCGGAGAAGGCCATAGCAGCAACTGTTTGTGCTAACATTCTAGAGGTTCCTAGTGATCAAAAGCTGCCATCACTTTATCTCTTAGACAGTATTGTTAAGAATATTGGGCGGGATTATATTAAATACTTTGCTGCCAGGCTACCTGAGGTATTCTGCAAAGCATATAGACAGGTTGATCCTTCTGTCCATCAAAGTATGAGACATCTTTTTGGAACTTGGAAAGGAGTCTTTCCTCCTCAGACCCTTCAGGTTATTGATAAGGAATTGGGCTTCACTCCTGCAGTCAATGGCTCTTCTTCTGCTTCTGCCACACTCAGGACTGATTCACCGTCACAACGTCCACCTCACAGTATCCATGTGAATCCCAAGTATTTAGAAAGGCAGCGTCTACAGCAGTCCAGCAGGGTTGCCATATTCATTCTTATTTCGCATCTCCGGTGCTTAATTCTTTTGGCATCTACTTTTTCTGTTATGAAGAATAAAGGAGTTGATGATATAACTGGAGCAATTTCAAACTCAAATGATGACCCAGAGATGCCAGGTAGAAATCTGAGTGTTGCACGACCATGGGCGGATCCTAGTGTTACTGTTAACATCCATTCACGTGAAAATGATCCCCGCACTCGTAGTGATGCATTCAATGATTCTGTTCCGGAGAAGAGCATTGGTGCATCCTATGGAGGCAATGAATATGGTACCAATCTTTCAAGGAATTTGGGTATGAGTATCAGCCCACCTGGTGGTATGGTGACTGAGTCAGGACACGACAAAAGTTGGTACAACAAATCTGGTGTTGTTGCTGGGACCATGCCTGGGCAAAGAAATGGTTTGGGTCTCAAGTATAGTTTTTTGAATACTGAAGCACCAAAGTCCATGATTTTGGATGCACATCATCAGTCATCACAAAACATAACTAGTACACGGAGCAGTGTGATCTCAGATAGCTGGAAAAATTCTGAGGAGGAGGAGTACACATGGGATGAGATGAACTCTGGCTTGACTGTTCATGGTGCATCCACTGTTAGCAACTTGAACAAAGATAGTTGGATTGCTGATGATGAGAATTTGGAAGTTGAAGACCGCATCCAAATCAGAAATCCTTTTGGGCCAAATGTTGACAGAGAAATGCCCATCGAATCTCAAGCAACTGAAAAGAAACATTTACTTGCATCTCGGCATCATCCATCACTATCATGGAAATTGCAAGAGCAGCATTCTGTTGACGAGTTAAATAGGAAGGCAGGTCACTCCAACAGGTTTGTGTCCACACTTGGTGGCATACCGGCCAATACAAATTCTTCTGCTTCCAGGATAGTTCATCGGCCTTTACTGTCAAATGCAACAATAGGATTGCCAGGGATTTCAGGACAATATCATTCTTTGGGAGCTGAAAACCCTTCTGGGCGGTCACCTTTGCGACAAAGGTCTCCGTCACCACCAGTAAGTGTGCACTGCTCTCATCCACTGCAAAATTTGGCAGAGCAAGACCTTCCCCAGACTAGTAAACATCTCAATTTCTGGGAGGGTACATTCTCTTCAATGACTTTTCAGGCAAGGCATCAGCAACAACTTGTCTCTTCTCACAGTGAAGTTACTGTTAAGACTGAGAAGCCTCCTGTGTCCAAAGTTCCTTTAGCCAGAGAAACTAAAAATGGCATAGATACAGGGAATCTTCCATCTCGATCAGGGGTTCGGCCTTCACGGTCAGTTGGTACTTCCACTTCCACACTAATTTCTTCAGTGTCCACAATTGCGTCACCGCCTTCATTAGGTCCTTCCAGCGATAATTTATCTGTTCTCCCAAAAATACCTCAAAGAAAGGCAGCACACCCACCAAGGGCATCTACTCTACCTCCAGCTTCCTCTAATGTCAGCAGTGCCTCAGCCAAGACATCAAGTGATACCAATAATACCTTGAATCCAATTGCAAACCTTTTAAGCTCTTTAGTTGCAAAAGGCTTGATATCTGCAGAAACAGAGTCCCCAACTAAGGTGCCTTCTGAGTTGCTTACTCGTTTGGAAGAACAAAGCGATAGCATTACGACCACTAGCTCATTGCCCGTGGCTTCATTGTCTGGTTCTGCAGCTGTCCCAGTCCCTTCTATCAAGGATGAGGTAGATGACACTGCAAGAACGCCTATATCCTTGTCTGAAACAACCAGCCCAGGAATCAGAAATCTCATTGGCTTTGACTTTAAGCCTGATGTAATACGAGAATTCCATTCATCTGTAATTAGTGGATTATTTGATGACCTTCCACATCATTGCAGCACATGTGGCCTTAGGCTTAGATTCCAAGAACAGTTCAACAGACACTTGGAGTGGCATGCCACAAGAGAAAGTGAACAAAGTGATTTAATTAGTGCATCAAGATGGTATCTGAAGTCAAGTGATTGGATTGTTGGCAAGGCTGAATATCCATCTGAGCATGACTTTACTGATTCTCTAGATACATATGGCAAGGAAGCAGATAAAAGTCAAGAGGATGCTATGGTTCTAGCAGATGAAAACCAATGCTTGTGTGTGTTGTGTGGTGAGCTGTTTGAAGATTTTTACTGTCAGGAAAATGGTGAGTGGATGTTCAAAGGGGTTGTTTACCTGGCTAACTCTGATAGCAATAGTGAGATGGGAATTCGAGATATGAGTTCTGGAAGGGGTCCCATCATTCATGCAAGTTGCTTATCGAATAACTCGATTTCCAGTGTCCTTGAATCGGTATGGCTTATTACTTGATGTATGTGGATAGAGACGCAGTTTTCTACTTTAAATACAAAGCTTCATTCGATCTATTTGGAAGAGTGGGTTGAGTTTAAATTTTTGGTTGCTAGGCTATGATATTGGTTGGAAGATGAGCACTAAAAGTTAAGAGTTTAATAGTCATGCATTGACAATATAAAATAATTTTACACTGTCAATAAAAAATATTTGGTAGTATTTTTAAGATAAACATTGTAAAAGTCAACAAATTTATCATACATGATGCTTTATGATTAGATAGCTGTAAAATAGTTATACACTGTTAGTGCGTATAGGCTATTTTCTCTAAAATTTAAGCTTGCCCTGTTACCAGAACAATGCAAATGGGGGGCTAGCTCCTCTGTTTCTCAAATTAAAAAAATGTATTTTGTTGTTTCCTTTTCGTCATGCGGCTTCCTTTTCCTCCATTCCTTTTTACTTAGAATTGAAGGACTTTCATTGCTGATAATATCTAGACCTGTTATATTTTGCAGGGACAGGATTAAAGCAAGCTTAGAACATTGTAGCTCTGTTCTAGCAAGAACTTAGAAGCCAGGGAACCCAGGTTTACTTTGCATTTACCAAATCTGATGGCTCTTGATGCTAAATTTATTTCTCTAATTGCTTTTTAGAGCTGTCAAACAAATTTTGTGCATTTTTTGTTTGTTTTTTTGTTTTCTTTAGTTTCTTTTGTATTCAGGAAGAAGAGGAAATTCCATAGTGTTCAAAGTATATAAATGCGATAGATTTTGCAGCTCAACTTTTGCTCATTGATGTGGTTGCATAACATCATTTGCATGATGAGGAGGATTTTTGCTTTTCAAACATGTGGTTGTAATATGGGGCAAAGCACTATGGCCGCAGTTTTCGCAAATGCTGGATGGCATTCTCTGTATCATTGGAATTGCTACTATTTTGATTCTCTTTTATGTGCTTTCCTTACACCCCTTCCTTCGCTAGGGGTTCTGGAATTGGGGTATTACTTGTTACCTGGGCATTGCTTTCCTAGTTTTCTAAATTACAGTTCTATGAAAAGTAATGGATGTTGATTTTAATTTTTCATGCTGAGTACTGAGAGTTTCTGTTTTGGTGGTCAATAAATAAGAAAGATGTGCAT 4660 0.412 MENSRRPFDRSREPGPKKPRLMEELDRAPNSGPRQFPQRQVGSGITTLSSGRLRTNDRDLESSDFGRRGGASSGGGGGGYQPQPLPFQELVSQYKAALAELTFNSKPIITNLTIIAGENQAAEKAIAATVCANILEVPSDQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHQSMRHLFGTWKGVFPPQTLQVIDKELGFTPAVNGSSSASATLRTDSPSQRPPHSIHVNPKYLERQRLQQSSRVAIFILISHLRCLILLASTFSVMKNKGVDDITGAISNSNDDPEMPGRNLSVARPWADPSVTVNIHSRENDPRTRSDAFNDSVPEKSIGASYGGNEYGTNLSRNLGMSISPPGGMVTESGHDKSWYNKSGVVAGTMPGQRNGLGLKYSFLNTEAPKSMILDAHHQSSQNITSTRSSVISDSWKNSEEEEYTWDEMNSGLTVHGASTVSNLNKDSWIADDENLEVEDRIQIRNPFGPNVDREMPIESQATEKKHLLASRHHPSLSWKLQEQHSVDELNRKAGHSNRFVSTLGGIPANTNSSASRIVHRPLLSNATIGLPGISGQYHSLGAENPSGRSPLRQRSPSPPVSVHCSHPLQNLAEQDLPQTSKHLNFWEGTFSSMTFQARHQQQLVSSHSEVTVKTEKPPVSKVPLARETKNGIDTGNLPSRSGVRPSRSVGTSTSTLISSVSTIASPPSLGPSSDNLSVLPKIPQRKAAHPPRASTLPPASSNVSSASAKTSSDTNNTLNPIANLLSSLVAKGLISAETESPTKVPSELLTRLEEQSDSITTTSSLPVASLSGSAAVPVPSIKDEVDDTARTPISLSETTSPGIRNLIGFDFKPDVIREFHSSVISGLFDDLPHHCSTCGLRLRFQEQFNRHLEWHATRESEQSDLISASRWYLKSSDWIVGKAEYPSEHDFTDSLDTYGKEADKSQEDAMVLADENQCLCVLCGELFEDFYCQENGEWMFKGVVYLANSDSNSEMGIRDMSSGRGPIIHASCLSNNSISSVLESVWLIT 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02342 1031 MobiDBLite consensus disorder prediction 674 696 - -
Pste4g02342 1031 CDD CID_Pcf11 91 207 IPR047415 -
Pste4g02342 1031 MobiDBLite consensus disorder prediction 581 605 - -
Pste4g02342 1031 MobiDBLite consensus disorder prediction 1 84 - -
Pste4g02342 1031 MobiDBLite consensus disorder prediction 218 237 - -
Pste4g02342 1031 MobiDBLite consensus disorder prediction 727 759 - -
Pste4g02342 1031 MobiDBLite consensus disorder prediction 1 27 - -
Pste4g02342 1031 MobiDBLite consensus disorder prediction 579 605 - -
Pste4g02342 1031 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 37 1018 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Pste4g02342 1031 MobiDBLite consensus disorder prediction 218 240 - -
Pste4g02342 1031 FunFam polyadenylation and cleavage factor homolog 4 83 211 - -
Pste4g02342 1031 MobiDBLite consensus disorder prediction 321 340 - -
Pste4g02342 1031 SMART 558neu5 89 211 IPR006569 -
Pste4g02342 1031 SUPERFAMILY ENTH/VHS domain 89 210 IPR008942 -
Pste4g02342 1031 MobiDBLite consensus disorder prediction 33 53 - -
Pste4g02342 1031 MobiDBLite consensus disorder prediction 666 696 - -
Pste4g02342 1031 ProSitePatterns Zinc finger C2H2 type domain signature. 877 897 IPR013087 -
Pste4g02342 1031 ProSiteProfiles CID domain profile. 86 214 IPR006569 -
Pste4g02342 1031 MobiDBLite consensus disorder prediction 737 759 - -
Pste4g02342 1031 Pfam CID domain 95 204 IPR006569 -
Pste4g02342 1031 Gene3D - 86 211 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02342 Pste-Chr4 16767456 16775055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02342 77 248 C2H2 Transcription Factor Family AT4G04885 59.884 6.22e-56 206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02342 4 16767456 16775055 Pste4g02342 4 16767456 16775055 ECH
Pste5g02200 5 14556618 14562852 Pste4g02342 4 16767456 16775055 PCT