Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02335 TTTAAAACCAATGATAGACCAACTAGAAACGAAACGATGATGATGATGATATTAAAGCAACAACATCAGGAGTGAGAGAGAGAAAAGCGCAAAGGTGGCTCCTTTTCATGTGAATTTTTAGTGATCAACTGATTCTTCAACTACCAACTTCTTATCTGCGTGAAAAAGGAAGCAGGAAAAAGAAATTAAAACATGGGTTGGATTCCCTGTTCTGGAAGTTCAAACACTAAGAAGAAATTAAAGAAATTGGAGAAGATGGAAGCACAGAGCAGCATAGTTGATCCGATCAAAGCCGCCCCAGGGAAGCTGAAGAGGAATTCATCCTTGAATTCCAAAGATTCCTCTAAACATGGAAACCCGGGTCACATTGCTGCACAGACATTCTCATTTCGTGAGTTAGCAACTGCCACTAGAAACTTCAGAGCCGAATGTCTTTTGGGTGATGGAGGATTTGGTCGAGTATACAAGGGACGTTTGGAAAATATTAATCAGATTGTTGCGATTAAACAACTTGACCGAAATGGGCTCCAAGGGAATAGAGAATTTCTTGTTGAAGTGTTGATGCTAAGTCTTCTTCACCACCCTAATCTTGTCAACCTTGTTGGTTATTGTGCTGATGGGGATCAAAGGCTTCTAGTTTATGAATTTATGTCATTAGGATCCTTGGAAGACCACTTACATGATATTTCTCCAGGCACGAAACGACTTGAGTGGAACACACGGATGAAAATAGCTGCCGGGGCTGCAAGGGGATTGGAATATTTACATGACAAAGCTAATCCTCCTGTCATATACCGAGATTTGAAGTGCTCCAACATTTTGCTTGGTGAAGGATATCACCCAAAGCTATCAGATTTTGGTCTGGCTAAACTTGGCCCAGTGGGGGAAAACACCCATGTATCAACAAGGGTTATGGGCACCTATGGATATTGTGCTCCAGAGTATGCAATGACAGGTCAACTGACTCTGAAATCAGATGTTTATAGCTTTGGTGTTGTTCTTCTGGAAATAATTACTGGCAGAAAAGCAATTGACAATTCAAAATCTGCAGGAGAGCAAAATCTTGTTGCATGGGCCAGACCCTTGTTTAAAGATCAAAGAAAATTTTCGCAAATGGCTGATCCAATGCTCCAAGGTCAATATCCTGCAAGAGGGCTATATCAGGCCCTTGCTGTTGCAGCAATGTGTGTTCAGGAGCAGGCCAATATGCGTCCGGTTATAGCTGATGTTGTCACAGCTTTGAGTTACCTTGCTTCACAAAAATATGACCCAAATACACAAACCGTACAAAGCTCTCGCCTTGCTCATGGTACTCCTCCTAGAATCAATAGAAGGGGATCGTGATATGGTGCTCAATGTTTGTTAGTTATTTGATAGTCTGGTGCAAATTTCAAATATCTTACAACACACTGCAAGTTATAGATTTGTAGATGCTAATACCGGTTTCTTATGGGTGGTGTTCTTTCTTTAGAGCATAGTTGCTAAAAATGTAAAATTTTGTTCTGCCTCTGGTAACCGAACTGCTCCTATTTCCATTTGGAGCCAAGATAATATATCCATTTCCTTAGTTTTTATTTAAAAGCAAATTTACTGGATTCATGATTCATGTTCCTTCTGTCTTCTCAATGGTTCCACTGGTGTACCAGCAATCCATAGTTGTCTATTTTTCTTTGTCCTGGTTATTTGTATAGTTATGAAACTATAAAATTTAGCCTTTTC 1719 0.4002 MGWIPCSGSSNTKKKLKKLEKMEAQSSIVDPIKAAPGKLKRNSSLNSKDSSKHGNPGHIAAQTFSFRELATATRNFRAECLLGDGGFGRVYKGRLENINQIVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLVGYCADGDQRLLVYEFMSLGSLEDHLHDISPGTKRLEWNTRMKIAAGAARGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKSAGEQNLVAWARPLFKDQRKFSQMADPMLQGQYPARGLYQALAVAAMCVQEQANMRPVIADVVTALSYLASQKYDPNTQTVQSSRLAHGTPPRINRRGS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02335 383 MobiDBLite consensus disorder prediction 37 58 - -
Pste4g02335 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Pste4g02335 383 ProSitePatterns Protein kinases ATP-binding region signature. 82 105 IPR017441 GO:0005524
Pste4g02335 383 CDD STKc_IRAK 82 350 - -
Pste4g02335 383 PANTHER OS07G0668900 PROTEIN 23 362 - -
Pste4g02335 383 Gene3D Phosphorylase Kinase; domain 1 60 152 - -
Pste4g02335 383 Gene3D Transferase(Phosphotransferase) domain 1 153 373 - -
Pste4g02335 383 ProSiteProfiles Protein kinase domain profile. 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g02335 383 SUPERFAMILY Protein kinase-like (PK-like) 56 350 IPR011009 -
Pste4g02335 383 Pfam Protein tyrosine and serine/threonine kinase 80 348 IPR001245 GO:0004672|GO:0006468
Pste4g02335 383 SMART serkin_6 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g02335 383 MobiDBLite consensus disorder prediction 363 383 - -
Pste4g02335 383 MobiDBLite consensus disorder prediction 40 58 - -
Pste4g02335 383 FunFam Serine/threonine-protein kinase PBS1 153 368 - -
Pste4g02335 383 FunFam Serine/threonine-protein kinase PBS1 48 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02335 Pste-Chr4 16733510 16737235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02335 30 355 Glycoside Hydrolase AT3G07070 66.871 8.08e-164 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pste4g02335 PK_Tyr_Ser-Thr 4.8e-45 CL0016