Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02333 ATGGGTACCTCCAATCTCCTCTTGTTCTTCTCTTTGGTGAGTCTGTGTGCTATGGCGGCTTCCAAGGTCGTGCTTATTGGGAACAATATCACTCTCTCCTTCGATGATATTGAAGCTAATTTTGCCCCAACAGTCAAAGGCTCTGGAGAATATGGGGTCTTATATTTGGCGGAGCCACTTGATGCGTGTACAGAACTGACAAATAATGTTGAACAACTTTCCAATGTGAGTTCACCTTTTGCTCTGGTGGTTAGAGGGGGATGTAGCTTTGAGGAAAAAGTCAGAAGGGCCCAAAAGGCTGGCTTCAAAGCTGTAATTGTCTATGACAATGAAGAAGGCGGTGTCTTGGTTGCGATGGCTGGAAATTCCGCTGGTATAAGAATACATGCTGTATTTGTGTCTAAAGCTTCGGGTGAAACACTAAAGAAATATGCTGGGTTGATTAATGTGGAAATGTGGCTCATTCCAACTTTTGAAAACTCGGCATGGTCAATCATGGCAATTTCATTTATTTCCCTACTTGCTATGTCTGCAGTGCTGGCCACTTGTTTCTTCGTCCGCAGGCATCGCATAAGAAGAGAAAGGCCTCGAGCTTCTCTTGTTCGTGAATTTCATGGTATGAGTAGTCGCCTAGTGAAAGCAATGCCAAGTTTGATATTTACCGCTGTTTTGGAAGATAACTGTACATCAAGAACATGTGCTATATGCCTTGAAGATTATTGTGTTGGTGAGAAGCTTAGGATTCTGCCCTGCTGTCACAGGGCATCAGTCAGCTTGAATTCCAAGCACTGTGTACAGTTCATTGTTGGATCCAATGTTGATCCT 825 0.4364 MGTSNLLLFFSLVSLCAMAASKVVLIGNNITLSFDDIEANFAPTVKGSGEYGVLYLAEPLDACTELTNNVEQLSNVSSPFALVVRGGCSFEEKVRRAQKAGFKAVIVYDNEEGGVLVAMAGNSAGIRIHAVFVSKASGETLKKYAGLINVEMWLIPTFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRERPRASLVREFHGMSSRLVKAMPSLIFTAVLEDNCTSRTCAICLEDYCVGEKLRILPCCHRASVSLNSKHCVQFIVGSNVDP 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02333 275 SUPERFAMILY RING/U-box 222 253 - -
Pste4g02333 275 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 157 253 - -
Pste4g02333 275 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 194 267 IPR013083 -
Pste4g02333 275 SUPERFAMILY PA domain 75 142 IPR046450 -
Pste4g02333 275 CDD PA_C_RZF_like 19 162 IPR044744 -
Pste4g02333 275 Gene3D - 18 154 - -
Pste4g02333 275 Pfam PA domain 60 141 IPR003137 -
Pste4g02333 275 FunFam Receptor homology region transmembrane domain-and RING domain-containing protein 2 21 155 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02333 20 258 C3H Transcription Factor Family AT1G22670 51.440 2.67e-74 231