Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02325 GCAGAACCCCCGATGCCAAGGTGGAAATATCTTCGTCCAACGTGGCACTTGGCAACATTCCACACCTCCACTTCATCCACGTCAGCAAACGCGGTCATCGCGGTCCGAACCCACCCAATATCTTTCTCCTCTCTCCTAAACTAACATAGGCGTTATCTGCTCCCTCACCGTACTGTCAGCTTGGTCAAGCTCCTTTCACTTCCCACAACAAAACACAACCTGGTTCAAGATTTTTATTTTTTTTTTAATTTTGTTATATCCTTATCCTAATTTCCTAATTCGATTTAGCTCTAAGGTTTAATTACAGCAGATTTATATTATTATTGTTATTATCATGTAATTTCAACCTATTTCATAATGACTCCATAATGGCGATTAGGGAAGTTTCGGAGCTGTGTCAGCGATTTAGCATAAAGAATACGATGCATCGTTTCTGGTTCTGGATGTTCATGTTCGACCAAAGATCTTTTATGGTTGTCCAGATGAGTGTCGATGGCGACAGCAAGGAGCTGAAAGAACTGAATCAGCAATTGCGAGATGGGAAGAAGATTGCTGGTGGGGAACAAGGTTTATGTGAGGGTGATGAAGTGAAATGTAATGGAGTTGCTGAAGAAGTTAAGGTTGGACAGGGGGGGACTGTGGAATCCTCCTCTGTCCAGCAGCATATACCACAGCCTCAAGGGGCAATAATTTGCTGGGAGAGGTTTTTGCATATTAGATCCCTTAAGGTCTTGCTTGTGGAGGATGACGACTCTACTCGGCATGTTGTCACTGCACTGCTTCGCAATTGTAGTTATGAAGTTATTGAAGCAGCAAATGGATTGCAAGCTTGGAAGATATTGGAGGATTTAACCAATCATATTGATCTCGTTTTAACTGAGGTGGCAATGCCTGGCTTATCAGGCATTGGTCTTCTATACAAGATTATGGGCCACAAAACCCGGAAAAATATTCCTGTTGTTATGATGTCATCTCATGATTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAAGGTGCTGTTGACTTTCTAGTTAAACCCATACGGAAGAATGAGCTTAAAAACCTGTGGCAGCATGTTTGGAGAAGATGTCACAGTTCTAGTGGGAGTGGCAGTGAAAGTGGTACACAAACCCAGAAATCTGTAAAATCGAAGAGTCTTGAGAAGTCAGACAATAATTCTGGAAGCAATGATGAAGATGAGAATGGAAGTGTTGGCCTGAATAATGGGGATGGAAGTGACAATGGTAGTGGCACTCAGAGCTCATGGACCAAACGTGCTATTGAAGTTGATAGTCCTAAACCAGTCTCCCAGTGGGATCAAATAGCTGAGTGCCCTGACAGTACCTGTGCTCAAGTTGTTCACTCCAATGCTGAAATAGGTGGAAACAAGGTGGTTCTACTAGCTGCAAAGGAGTGCCCAGAACAGAACGAACAACCTGGTAAGGCCAAAGTGCCTTGA 1460 0.4301 MAIREVSELCQRFSIKNTMHRFWFWMFMFDQRSFMVVQMSVDGDSKELKELNQQLRDGKKIAGGEQGLCEGDEVKCNGVAEEVKVGQGGTVESSSVQQHIPQPQGAIICWERFLHIRSLKVLLVEDDDSTRHVVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLVLTEVAMPGLSGIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSKSLEKSDNNSGSNDEDENGSVGLNNGDGSDNGSGTQSSWTKRAIEVDSPKPVSQWDQIAECPDSTCAQVVHSNAEIGGNKVVLLAAKECPEQNEQPGKAKVP 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02325 363 MobiDBLite consensus disorder prediction 243 299 - -
Pste4g02325 363 SUPERFAMILY CheY-like 117 243 IPR011006 -
Pste4g02325 363 PANTHER TWO-COMPONENT RESPONSE REGULATOR 119 305 IPR045279 GO:0009736
Pste4g02325 363 MobiDBLite consensus disorder prediction 243 260 - -
Pste4g02325 363 CDD psREC_PRR 121 224 - -
Pste4g02325 363 SMART REC_2 119 234 IPR001789 GO:0000160
Pste4g02325 363 Pfam Response regulator receiver domain 121 232 IPR001789 GO:0000160
Pste4g02325 363 ProSiteProfiles Response regulatory domain profile. 120 238 IPR001789 GO:0000160
Pste4g02325 363 MobiDBLite consensus disorder prediction 274 299 - -
Pste4g02325 363 Gene3D - 118 277 - -
Pste4g02325 363 FunFam Two-component response regulator-like PRR37 119 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02325 Pste-Chr4 16694581 16704965 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02325 103 358 Response Regulator Gene Family AT5G60100 61.538 1.05e-91 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste4g02325 Response_reg 4.3e-23 CL0304