Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02317 AACACACTTCTTTCCATTCCATTCTTTTCGTCATTTCTTCCCTATTCCAACCCTTTTTGTCCCCCCAAACTTGAGAGGGTACGTCTGAAGAGAAAATAAACACCAAACTAAGAAAAATAATAATGTCACCAACACCAACACCAACGCCAACGCCAACGCCAGCGTTAGCGTTTGGTGCTGTAGAAACTCCAAATGGAGACTCTTCTCATCACAGCAATCTCCCTCCCAAACGCAGCCCTCAAGAATCGCGTGACCTCTCTCCTTTTTTGTCTTCTTCTTACCCTATCACTCTTAAGTTCATGGACGTAGCATACCGGCTCAAGATAGAGGACAAACAAAAAAGTGGCGGGAGCATCAAGAAGTTGTTTACTCTCAACGACTCATCACCGTCTGATCATCAAGGATCTAGGGCTGGAGCGCCGCAAGAGCGAACTATTTTAAAGGGCGTAACGGGGATAGCACAACCAGGGGAGATCTTAGCGGTACTGGGCCCATCAGGGAGCGGGAAATCAACGCTCCTTAACGCGCTCGCAGGGAGGCTCCATGGGCACGGCCTCACGGGAACAATCCTCGCCAACTCCAGCAAACTCACAAAACCGGTTCTACGGCGAACCGGATTCGTTACGCAGGACGACATCCTCTACCCCAACCTAACGGTTCGCGAGACGCTGGTGTTCTGCGCCATGCTGCGGCTCCCGCGCTCGCTGCTGCACGCGGCGAAGGTCGCGGCCGTGGACGCAGTGATTGCAGAGCTAGGGCTTGGGAAGTGTGAGCACACCATAATTGGAAACAGCTTCATCCGCGGCGTCTCGGGTGGGGAGAGGAAGCGCGTGAGCATCGCGCACGAGATGCTGGTGGACCCTTCGCTGCTCATACTGGACGAGCCAACCTCCGGTTTGGACTCCACGGCGGCGCACCGCCTGATGGTGACGCTGGGTTCCCTCGCAAAGAAGGGCAAAACGGTTATAAGCTCGGTCCACCAACCTTCGAGCCGTGTCTACCAGATTTTCGATAAAGTTCTTTTGCTATCGGAAGGACAGTGTTTGTACTTCGGCAAAGGAAGCGACACGATGCGGTACTTTCAGTCGGTTGGCTTCGCGCCGTCTTTTCCGATGAATCCAGCTGATTTTCTGCTTGATCTCGCTAACGGTATTTGCCATGTTGATGGTCAAAGTGAAAAAGATAAACCAAACATAAAGCAAAACCTAATCCATTCATACAACACAGTACTGGGTCCCAAGGTGAAAGCTGCCTGCATCGACACTGCCACTGTTCCTACAAAAAGCACAAACCCTTTGAGAAGCAGCTCTTCGAAAGAATGTAGACGTAGCGACAGGGTTAGCTTCTTTGATTGGTTTTACCAATTCAGTATTCTGCTCCAGAGAAGCCTGAAAGAAAGAAAGCACGAATCCTTCAACACGCTGAGAGTCTCTCAAGTAATTGCTGCAGCACTATTATCTGGTTTAATGTGGTGGCACTCAGACTACAGGAACATTCAAGATAGGCTTGGCCTACTCTTCTTCATTTCCATCTTTTGGGGAGTGTTCCCGTCTTTCAACTCAGTATTTGCATTCCCTCAAGAACGTGCCATCTTCATGAAAGAGCGAGCTTCTGGTATGTACACATTGTCCTCCTATTTCATGGCTCGAATTGTTGGAGACCTACCCATGGAGCTTATTCTTCCCACGATTTTCCTCATAGTGACATATTGGATGGGTGGATTAAAGCCTGATTTTTGGGCTTTTCTCATGACTTTGTTGGTTGTGCTTGGATATGTGATGGTGTCACAGGGTCTTGGGCTTGCTTTAGGTGCAGCAATAATGGATGCCAAACAGGCATCCACGGTGGCAGCAGTAACAATGCTAGCATTTGTGTTGACAGGTGGATACTATGTCCATAAGGTGGCCTCTTGCATGGCTTGGATTAAATATATATCCACAACCTTCTACTGTTATAGGCTGCTGACTAGAATCCAGTATGAGGATGGCAAGAAGATATCATATCTACTGGGTTGCTATCACGGTGATAAGGGTGGCTGCAGGTTTGTTGAAGAGGATGTGGTGGGTCAAATTGGCACTGTTGGATGCATTGGGGTGCTGTTTTTCATGTTTGTGTTTTACAGATTATTGGCCTACCTTGCTTTGAGGCGCATCAAGAGTTGAAACTTGAAATTAAATGTCTGTGTTGCAGCATACTTCTTTTGGGAAAGCTTGAATGCAGAGAAGGATGGATCAATTTGTTGGCTTGGCTCCTAGTGCAGCAGTGTCACCTCTTTTACACTAGGCTAGACTGGCAGGCTAGTTGATTCGTACTAACTGGAAATTGAAGACTGAATGAGAGATTTTCTGTTGTAATTGTAAAGTTAGAGAATTAATTAACAAGCAAAATTGAAGTGAAGAGAGAAATTAAACTAAGAAGAGTAATTGTAGATTTCGATTTCAAATCGCTCTGCAAGTTCATTCTGTATTCAGAATATGTTAAGGGA 2485 0.472 MSPTPTPTPTPTPALAFGAVETPNGDSSHHSNLPPKRSPQESRDLSPFLSSSYPITLKFMDVAYRLKIEDKQKSGGSIKKLFTLNDSSPSDHQGSRAGAPQERTILKGVTGIAQPGEILAVLGPSGSGKSTLLNALAGRLHGHGLTGTILANSSKLTKPVLRRTGFVTQDDILYPNLTVRETLVFCAMLRLPRSLLHAAKVAAVDAVIAELGLGKCEHTIIGNSFIRGVSGGERKRVSIAHEMLVDPSLLILDEPTSGLDSTAAHRLMVTLGSLAKKGKTVISSVHQPSSRVYQIFDKVLLLSEGQCLYFGKGSDTMRYFQSVGFAPSFPMNPADFLLDLANGICHVDGQSEKDKPNIKQNLIHSYNTVLGPKVKAACIDTATVPTKSTNPLRSSSSKECRRSDRVSFFDWFYQFSILLQRSLKERKHESFNTLRVSQVIAAALLSGLMWWHSDYRNIQDRLGLLFFISIFWGVFPSFNSVFAFPQERAIFMKERASGMYTLSSYFMARIVGDLPMELILPTIFLIVTYWMGGLKPDFWAFLMTLLVVLGYVMVSQGLGLALGAAIMDAKQASTVAAVTMLAFVLTGGYYVHKVASCMAWIKYISTTFYCYRLLTRIQYEDGKKISYLLGCYHGDKGGCRFVEEDVVGQIGTVGCIGVLFFMFVFYRLLAYLALRRIKS 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02317 679 MobiDBLite consensus disorder prediction 24 47 - -
Pste4g02317 679 Pfam ABC transporter 106 257 IPR003439 GO:0005524
Pste4g02317 679 Pfam ABC-2 type transporter 286 383 IPR043926 GO:0140359
Pste4g02317 679 MobiDBLite consensus disorder prediction 1 47 - -
Pste4g02317 679 Gene3D - 96 323 IPR027417 -
Pste4g02317 679 FunFam ABC transporter G family member 22 94 323 - -
Pste4g02317 679 MobiDBLite consensus disorder prediction 80 100 - -
Pste4g02317 679 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 37 671 - -
Pste4g02317 679 MobiDBLite consensus disorder prediction 80 97 - -
Pste4g02317 679 SMART AAA_5 115 314 IPR003593 GO:0016887
Pste4g02317 679 Pfam ABC-2 type transporter 413 618 IPR013525 GO:0016020|GO:0140359
Pste4g02317 679 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 66 329 IPR003439 GO:0005524
Pste4g02317 679 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 322 IPR027417 -
Pste4g02317 679 CDD ABCG_EPDR 103 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02317 Pste-Chr4 16671848 16679523 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02317 116 343 Calmodulin-binding Proteins AT2G36910 27.155 4.79e-11 64.3