Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02314 GGGAAATAAGAGGACAATATGGGACCAGAGAAGAGGCGATGAAATGAGTGTAGTGGAAGTCGTGTTGGGACAAGTGGTGGTGTGCAGCGCACATATACCCATTACCATTTTTCTCTCTCTATTAATATTATGTTTTTCTGTGGTTGTGGCGGACCATGAACTCCAATTCTCAGTCTATGGCGGCGCCACCACCAACCACTGATCTCTCTGCTAAGAAGGTGAGAAAGCCTTACACCATTACCAAGTCACGAGAGAGTTGGACTGAGGAAGAGCACGACAAGTTTCTCGAAGCTCTTCAACTATTTGACCGGGATTGGAAGAAAATTGAAGATTTTGTAGGTTCCAAAACAGTTATTCAGATTCGAAGCCATGCCCAGAAATACTTCTTGAAAGTTCAAAAGAATGGGACTGTGGCACATGTGCCCCCTCCCCGTCCAAAGCGCAAAGCTGCTCATCCTTATCCACAAAAGGCATCAAAAAATGTTTTGGTGCCACTACCAGCTTCCATTGGTTATGCTTCTTCAACAAATACACTTGCACCTGGGTTCCCCGCATGGGATGAAACTTCCCTGCTGATGAAGGCCAGAGCCAGTAAATCCATGGCCTGTCAGGATGAAGTCAACAATCTTTGTGGAAATGAAGGCATGCATACTTCTTTTTATTGTTCTGATATTGGATCAAAGGGGATAACACAGATTACCAACAGCAGTCTTAGTGGCGTTGGAAATTCTACTAGAACGCTACCACCAACTCCTGAGATACCAAAGCAAGGGAAACAAGCTCCGGTGCTTCATGGTTTGCCGGATTTTGCTGAAGTTTACAGTTTCATTGGAAGTGTATTTGATCCAGATACAAACGACCATGTCCAGAAGCTGAAGGAAATGGATCCTATAAATTTTGAAACTGTTTTGTTGTTAATGAGAAATCTCACTGTCAACTTGTCTAGCCCTGACTTTGAACCCATCAAGAAGGTATTGTCAACATATGATGTCAATACAATGGCAGTAGGAATTGATGTCAAGAAGCAGACAAATGATCTATCATGTCAAACCGCTTAACCACTAGCAATTTGTTGATATGGTATGTTTTTCTTCTCATTTTCTGCAGTTTTTTTCCCCCTTTCCTTGTCTGTTTCAATTCTAACATCATCTACAGTTAGGTAGGACGAATTTGGATGGAAGACTGAGGTTTTGCTCGGCCAGCAGTAGGGCGTAGGAATATCTTGCACCCACTGTAAAGCCTGTAAATGTAACCGTAGTCCTTTGTAACCACAGCCAAAATAGTATATGTTAGAAAGCTGAAGAGCACAACATATTTTTTCAGCTGATTCTATGGTCTATAATAACCATTGTTGTATTGCAATGATTTTGCCTTCGAGTATAAACATAGGTCTATAAGATATTTTTAATGACACAAATGTATCATAAAAAAATTAGAAAAAAGGGGAGTGAGCAATTAGTGTCTAGTATCAACGTGGCCTTTCGTTGCCAAATCTGTGTTTGTAAAGTCACACTTCTTCGACATACTTCATTCTCGTGTTTCAGCCCTGTGAGTCCTGGTTTGACAGTTGAATGACTTTTTCATTAGATTAGTAAAGATAATTTCAATGTAAGGTGCA 1618 0.4091 MNSNSQSMAAPPPTTDLSAKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTVAHVPPPRPKRKAAHPYPQKASKNVLVPLPASIGYASSTNTLAPGFPAWDETSLLMKARASKSMACQDEVNNLCGNEGMHTSFYCSDIGSKGITQITNSSLSGVGNSTRTLPPTPEIPKQGKQAPVLHGLPDFAEVYSFIGSVFDPDTNDHVQKLKEMDPINFETVLLLMRNLTVNLSSPDFEPIKKVLSTYDVNTMAVGIDVKKQTNDLSCQTA 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02314 300 Gene3D - 35 82 - -
Pste4g02314 300 ProSiteProfiles SANT domain profile. 30 83 IPR017884 -
Pste4g02314 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 27 81 IPR017930 -
Pste4g02314 300 SMART sant 31 79 IPR001005 -
Pste4g02314 300 SUPERFAMILY Homeodomain-like 26 82 IPR009057 -
Pste4g02314 300 PANTHER SWI/SNF COMPLEX-RELATED 15 263 - -
Pste4g02314 300 MobiDBLite consensus disorder prediction 85 104 - -
Pste4g02314 300 Pfam Myb-like DNA-binding domain 32 77 IPR001005 -
Pste4g02314 300 ProSiteProfiles Myb-like domain profile. 27 77 IPR001005 -
Pste4g02314 300 CDD SANT 34 77 IPR001005 -
Pste4g02314 300 NCBIfam myb-like DNA-binding domain, SHAQKYF class 30 79 IPR006447 GO:0003677
Pste4g02314 300 FunFam protein REVEILLE 6 isoform X1 34 82 - -
Pste4g02314 300 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02314 Pste-Chr4 16639152 16645792 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste4g02314 Myb_DNA-binding 4.4e-12 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02314 4 16639152 16645792 Pste4g02314 4 16639152 16645792 ECH
Pste5g01802 5 11409187 11412787 Pste4g02314 4 16639152 16645792 PCT