Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02312 ATGGAAGCAGCAACGCTCAACAGCAACAGCAACAACATCGTTGCTGCAGGGTCACCCCCACCACCCCCAATGTCTCTGCCCATGAACATGAATGTTAACATGAGCATGAACGTGACAAAGACCGAACAAACACCACTTGCAGCAACTCCAACAGCAGTGGTTCCTCATGTGCCAGCTCCAGCTCCAGCTCCAGCTCCAACTCCAACTCCAACAACAACACCAGGGAGTTTGGACTTGTTTGGGAAGAAGAAGAGAGGGAGGCCCAGAAAGTATGATGCAGATGGGAACCTGAGGGTCAGTGCAACCCCAACGCCACAGCCACCACCGGGTTTCACTTTGTCCACTCCCTGTGAGTTTTCTTCTTCCAAAAGGGGGCGTGCCAAGCACACAGCTTTTGCCAACTACCAACTCTATTCTTCTTTTGGTGAGGTGTTTGCAAACACTGCTGCTGGGGATTTTATACCGCACGTGGTGACTGTTTATACTGGGGAGGATGTTGCTGGAAAGATCATGTCATTTGCTCAGAAGGGTCCAAGGGGAATATGCGTCCTCTCTGCCAATGGAGCTATCTCGAATGTAACCATCCGCCAACCCGGCTCTTCTGGTGGCATATTGACTTACGAGGCATGGACAGTGTTGCGTGCATTTATGTCAGGTGATCTTTGTTTGTCTCTTCTTGTGGGGTTGGACAAAGGTCGATTTGAGATTTTATCTTTGTCTGGATCGTTCACAGTCGCTGACCAAAATGGCATGAAAAGCCGAACTGGTGGATTGAGTGTCTCACTTGCTGGCCCTGATGGTAGGGTGATAGGAGGTGGTGTTGCTGGACTTTTAACAGCAGCTGGCCCCATCCAAATTGTGGTAGGAAGTTTCTCTCAAAATGGTTACAAGACCCAAAAGAAGAAGTATCAACGTGAACAACAAACAGTGGCCTCTCCTACTTCAGCTGTTCCAGAAACAGTGACAATGGCAAGACCTATCTCACAAGCAAATGCTGATGGTGAAAGCTTTATGATACCTATGACTCAGTTACCAGATCAAAACCAGAGAGAAACTGCGAGTATTTCAAGTGACAAACAGAACCTAGATGCTACACCTGATGCAGCTGCTACATGGAATGGTTCTGAGGAGTTTTCAGACCAAAGGACATCCCCAGACATCAACATAACTCTGCCGGATGAATAGAAGGTGATGCAGAGGCTGACATGGTAACCGATCGAATGAAACTAACTCCGGAACCTTGTCATGACAACTACTAGGTTATATGACATGATGTACAGTTGTCAGAAATTAGAAAGGATTGAGGCCTCATTATTTATTCATCTTACAGTTTCTGTTGAACTCTCATAAGTTTTCTTTCATTTCTTCTTGAGGGGTGGATGAGATGATCGAAGACTTTGTAGGCTATTTATTCTGTTGGGATTATTTCGGTGAAATTACTTGTAATTTTCAACTTTTTCACATTTGGGAAGCTTCTAAGAGTTTTTTATATTATTATGGATCCAACAACTATATACATAAAAGTTTCTTTTGAGTTCTG 1540 0.4506 MEAATLNSNSNNIVAAGSPPPPPMSLPMNMNVNMSMNVTKTEQTPLAATPTAVVPHVPAPAPAPAPTPTPTTTPGSLDLFGKKKRGRPRKYDADGNLRVSATPTPQPPPGFTLSTPCEFSSSKRGRAKHTAFANYQLYSSFGEVFANTAAGDFIPHVVTVYTGEDVAGKIMSFAQKGPRGICVLSANGAISNVTIRQPGSSGGILTYEAWTVLRAFMSGDLCLSLLVGLDKGRFEILSLSGSFTVADQNGMKSRTGGLSVSLAGPDGRVIGGGVAGLLTAAGPIQIVVGSFSQNGYKTQKKKYQREQQTVASPTSAVPETVTMARPISQANADGESFMIPMTQLPDQNQRETASISSDKQNLDATPDAAATWNGSEEFSDQRTSPDINITLPDE 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02312 394 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 52 360 IPR039605 GO:0003680
Pste4g02312 394 MobiDBLite consensus disorder prediction 347 388 - -
Pste4g02312 394 MobiDBLite consensus disorder prediction 1 15 - -
Pste4g02312 394 Pfam Plants and Prokaryotes Conserved (PCC) domain 155 292 IPR005175 -
Pste4g02312 394 MobiDBLite consensus disorder prediction 56 71 - -
Pste4g02312 394 CDD DUF296 155 291 IPR005175 -
Pste4g02312 394 MobiDBLite consensus disorder prediction 56 112 - -
Pste4g02312 394 MobiDBLite consensus disorder prediction 347 394 - -
Pste4g02312 394 SUPERFAMILY AF0104/ALDC/Ptd012-like 152 298 - -
Pste4g02312 394 MobiDBLite consensus disorder prediction 1 25 - -
Pste4g02312 394 ProSiteProfiles PPC domain profile profile. 150 316 IPR005175 -
Pste4g02312 394 Gene3D - 155 310 - -
Pste4g02312 394 MobiDBLite consensus disorder prediction 80 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02312 Pste-Chr4 16617690 16621927 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02312 82 361 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 46.599 1.14e-66 214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02312 4 16617690 16621927 Pste4g02312 4 16617690 16621927 ECH