Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02301 ATGAACCATTGCCATATCTTGTTCTTGTTTTTATTTCTCTTACCGTTTTCCACCTTGAGCATCCACCACAATGACACTCATGCACTCACCCTTTTCCGACTCCAAAGCGACCTCCACGGCTATCTTCTTTCTAACTGGACCGGCGCCGACGCCTGCGCCTCCGCATGGCGCGGCGTTCTTTGCTCTCCGAACGGCCGCGTCACCGCCCTCTCCCTCCCTTCCCTCAACCTCCGAGGCTCCATCGACCCTCTCACTCCCCTCACCCACCTTCGCCTCCTTGACCTCCACAATAACCGCTTAAACGGCACCGTGTCGTCTCTTTTCTCAAACTGCACCAACCTCCGCCTCCTCTACCTCGCCGGCAACGACTTCTCCGGCGACATTCCGCCGGAGATGTCGTCCCTGAATTCCCTCCTCCGCCTGGACCTTTCCGACAACAACATTCGCGGCAAGGTGGACTTTGTGGCAAACTTAACAGAACTGATAACGTTAAGAGTTGAGAACAACCTTCTCTCCGGCGAAATCCCGGACCTGTCTTCCTCCATGAAAAACCTAGAAGAACTCAACATGACAAACAACGAGTTCTACGGTAGGTTACCAAACCCCATGCTGAAGAAATTCGGAGCCACAACCTTTTCGGGGAACGAAGGGCTATGTGGTGCAACACCGTTTCCCGTTTGTTCCTTCAGCAGAAACCCTCGAAATGGTAATGAAGCGTCGCCGACGGTTCCTTCAAACCCTAGCTCGTTCCCTGAGACGAGCGTGATCGCTCGACCAGGGAAGGAGGCACGGAAGGGGTTGAGCCCTGGTGCCATAGTGGCCATTGTGGTGGCCAACTGCGTGGCGTTGCTTGTTGTGACTTACAATGGTAGTGAGAAGAAGGTGTATGCGAGTGATGGGACAAGTGGGACCGATAGGAGTAGGCTTGTGTTTTTTGATCGGAGGAGTGAGTTTGAGTTGGAGGATCTGCTCCGTGCTTCGGCGGAGATGCTTGGGAAGGGGAGTTTGGGGACGGTTTATAGGGCGGTTCTTGATGATGGATGCACTGTGGCTGTTAAGAGGCTCAAGGATGCTAACCCTTGCGCCCAGAATGAGTTTGAGCAGTATATGGATGTCATTGGGAAGCTTAAGCATCCTAATATTGTCAGACTCAAAGCTTACTACTATGCCAAGGAGGAAAAGCTTCTTGTCTATGATTATCTCTCCAATGGAAGCTTGCATGCTCTTCTTCACGGGAACCGTGGTCCGGGGAGAATTCCATTGGATTGGACTACAAGAATAAGCTTGATGTTAGGGGCAGCAAGAGGTCTTGCAAAGATTCACGCAGAGTACAGTGCAGCCAAAGTTCCACACGGGAACGTGAAATCATCCAACGTGCTTCTAGACAAGAACGGCGTTGCATGCATCTCAGACTTTGGCTTATCACTCCTGTTGAACCCGGTTCACGCCATTGCACGATTGGGGGGGTACAGAGCCCCAGAACAGGAACAAAACAAGAGGCTGTCACAGCAGGCTGACGTGTACAGTTTCGGGGTGTTGCTGTTGGAAGTTCTCACGGGAAGAGCACCTTCATCACAGTACCCTTCACCGGCTCGTCCCAGAATGGAGGAAGAGGAAATAGCCGTGGTGGACCTCCCCAAGTGGGTTCGCTCTGTGGTGAAGGAAGAGTGGACTTCAGAGGTGTTTGATCAGGAACTTCTGCGCTACAAGAACATTGAGGAAGAGCTTGTGTCCATGCTGCATGTGGGGTTGGCTTGTGTGGTGGCACAGCCAGAAAAGAGGCCAACTATGGAGGAAGTTGTGAAGATGATTGAGGAGATCAGGGTGGAGCAATCTCCTATTGGAGAGGACTATGATGAATCGCGCAATTCGCTTTCACCTTCCATTCCCACCACTGAAGATGGTCTAGCATAGAACTAATGTTCAATATTATTGTCTGGTATATATAAGATTAATTAATGTCATAGTCTAGTTACTTCCAGTGTAGTAATTAGCTCCTCTTCTTGCTGCATTGTCCCAATGCACATTACTTATTGGCGTTGTTCAGTGTTCTTTGTCAAATTTGAGTCTTGTGGAATTCCATTGTTGATCGTAGCAGATATCTGACTGATGGACGATCTTGAACTTGAGGTTAGAATAAGTACTGCTATGCAGTTGAATTGTATAATATAACATTTGGAGTTTGCATCAGTGGACGGTCTTGAGATGTAATTGGTACAATTCAATGGCATTGTCATGAAAGCACTTTCAACCACAA 2257 0.4953 MNHCHILFLFLFLLPFSTLSIHHNDTHALTLFRLQSDLHGYLLSNWTGADACASAWRGVLCSPNGRVTALSLPSLNLRGSIDPLTPLTHLRLLDLHNNRLNGTVSSLFSNCTNLRLLYLAGNDFSGDIPPEMSSLNSLLRLDLSDNNIRGKVDFVANLTELITLRVENNLLSGEIPDLSSSMKNLEELNMTNNEFYGRLPNPMLKKFGATTFSGNEGLCGATPFPVCSFSRNPRNGNEASPTVPSNPSSFPETSVIARPGKEARKGLSPGAIVAIVVANCVALLVVTYNGSEKKVYASDGTSGTDRSRLVFFDRRSEFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCAQNEFEQYMDVIGKLKHPNIVRLKAYYYAKEEKLLVYDYLSNGSLHALLHGNRGPGRIPLDWTTRISLMLGAARGLAKIHAEYSAAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYRAPEQEQNKRLSQQADVYSFGVLLLEVLTGRAPSSQYPSPARPRMEEEEIAVVDLPKWVRSVVKEEWTSEVFDQELLRYKNIEEELVSMLHVGLACVVAQPEKRPTMEEVVKMIEEIRVEQSPIGEDYDESRNSLSPSIPTTEDGLA 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02301 637 SUPERFAMILY L domain-like 24 203 - -
Pste4g02301 637 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 401 616 - -
Pste4g02301 637 MobiDBLite consensus disorder prediction 235 253 - -
Pste4g02301 637 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Pste4g02301 637 MobiDBLite consensus disorder prediction 235 254 - -
Pste4g02301 637 Gene3D Ribonuclease Inhibitor 17 86 IPR032675 -
Pste4g02301 637 Gene3D Ribonuclease Inhibitor 87 234 IPR032675 -
Pste4g02301 637 Pfam Protein kinase domain 329 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g02301 637 Pfam Leucine rich repeat 89 148 IPR001611 GO:0005515
Pste4g02301 637 FunFam pollen receptor-like kinase 1 295 400 - -
Pste4g02301 637 SUPERFAMILY Protein kinase-like (PK-like) 329 605 IPR011009 -
Pste4g02301 637 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 610 IPR046959 -
Pste4g02301 637 ProSiteProfiles Protein kinase domain profile. 325 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g02301 637 Gene3D Transferase(Phosphotransferase) domain 1 401 625 - -
Pste4g02301 637 MobiDBLite consensus disorder prediction 612 637 - -
Pste4g02301 637 Gene3D Phosphorylase Kinase; domain 1 295 400 - -
Pste4g02301 637 FunFam Nuclear pore complex protein NUP107 22 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02301 Pste-Chr4 16515295 16518285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02301 18 633 Receptor kinase-like Gene Family AT2G36570 65.303 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste4g02301 Pkinase 5.3e-36 CL0016