Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02299 CGTGAGCAGCAGGTCCAAATCTCCCCTCCACCCACTCCAGAACTAACAAAAGCGCGTATACCACACTCGCTCATAGCACTTAACGGGACCGTCACCACTCGTGACGGCAGATACCAGACCAACTCACGGAAGGCACGCTCCGTCAAACCCTCCCTCACACACCTTCTCTCAACGCCCCATTCTCTTTCCCTAACGTCCACGACGACGCCGTAACGTCCTCCCTCACCCGCCCCTCATGGCCTCCTGCGACGACGACGACGACTTCTCTCTCCTCCGTGACGACAACCACCACCTCCACCAACCCTACGCGCCGCACCATCACTTTTCCTCCTCCCCCGTCCCCCCCAAACCCGTCGCCGACGACGCCGATGACTACGGAAATCCCTTCGAAGACGACGGTGGCGGCACCGAGAAGCGCAAGGAGCGCGACGAGATCATCGAGGGAGCGTCGTCGTACGGTTTCAACAAGAGATCTAAGGCTCCACCGCCCAGCGGCGCCGGCGCCGCTGAGTACCGTAAGGACAGGGAGGAGTGGAGTGACACGGCGATCGTGTGCCTCCTGGAGGCGTACACGGAGAAGTTCACGCAGCTGAATCGGGGGAATCTGAGGGGAAGGGATTGGGAGGAGGTTGCGGCGGTGGTGAGCGAACGGTGCGAGAACCAGTCGAAGAGCGTGGAACAGTGTAAGAACAAGGTCGATAACCTAAAGAAGAGGTACAAATTGGAGCGACATAGAATGAGCAGTGGCTGCATTTCCACCAGTCACTGGCCTTGGTTCAAACAATTGGAACAGATCGTCGGAAATTCTCTTCCGGCGAAGTTCTCCGACGAGGAAAAAGCGATTGTTTCTGCCGGAACTTCGCCCAGGCAATCGAAGAGAGGTATTGCTGCATTTCAACAAATGTCATGCTGTCTTCACTTGCACACTTCTTGTTTACATATCACATGGGAGCTTGAAACCGTTGTGGCATATGGAGTAACAACACCGAGTGCTGGAGGTCAAGCAAATAGCTTGAAGTCCAAAGCATTGTCAAACCTTAGATGGCGGAGGGTAGTCCTCAAAATTAGTGGAGCAGCTCTTACTGGATCTGATAACTGCAATATTGACCCTAAGGTGGCCATGTTAGTTTCAAGAGAAGTTGCCATAGCTTCCCGCCTTGGTGTGGAGGTATCAGTTCTGTTGATTGTTCTCTGGACTCTGTTATTATGCTACCCTTTTCAGCAGCTTTTGATATTTCAGGTTGCGATTGTTGTTGGAGGGCGCAATTTCTTCTCTGGAGATGCATGGGTAAATGCGACAGGTTTAGAAAGATGTACTGCATACCAAGTCGGCATGATGGCAACTGTGATGAATTCAATATTGCTCCAATCGACTCTAGAGAAGATGGGTGTTCAGACTCGTGTACAAACTTCAGTTGCCATGCAGGAGTTTGCTGAACCATACAATAGGCACCGGGCCATCAGACATCTCGAAAAAGGAAGAGTTGTTATATTTGGTGGCATTGGTTTTGGTGCTGGCAATCCTCTCTTCTCAACTGACATAGCTGCTGCTCTTCGTGCTTCAGAGCTTAGTGCTGAAGCAGTCCTAAAGGGTACCAACGTAGATGGTGTATATGATTGCAACTCAAGAGACAACAATTTCACATTTGAGCACATATCCTTCAGAGAGTTGGGTTCAAGAGGCGTCACCACAATGGATATGTCAGCGCTGACATTCTGTGAGGAAAATGCTATTCCTGTTGTGGTTTTTAATCTCCTGGAGCCTGGGAACATCTCAAAAGCTTTGTGCGGAGAACAAGTTGGCACACTAATTGACCAAACTGGGGCAATAAGCTAACAGATTTATTCAGCCAATTCAATTATTATTAGTCACACCGGAGCCATCAAGTTGAATGGGATATTTGCCATTACTGAGATTCTTGAAGAATAAAACATAAAATCTAAACGGATTCAGCGTGTGGCCAAGTTAGTGGAAATTGTACTTTGGAACTGTAATCACTAATTTTAGGCGGTGGTTGTACTTTTAATAAGCTTCTGTAAAAAGAAAAAAAATGTATATTATTCCTAGATGAATTGTAGCATAGTAATGTATTAGCAGTAGTCATTCCTTGTTAGTAAATGTAAAAGATACAAGAGTAATTCAACTTTTATTTATTATTGC 2161 0.4803 MASCDDDDDFSLLRDDNHHLHQPYAPHHHFSSSPVPPKPVADDADDYGNPFEDDGGGTEKRKERDEIIEGASSYGFNKRSKAPPPSGAGAAEYRKDREEWSDTAIVCLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCENQSKSVEQCKNKVDNLKKRYKLERHRMSSGCISTSHWPWFKQLEQIVGNSLPAKFSDEEKAIVSAGTSPRQSKRGIAAFQQMSCCLHLHTSCLHITWELETVVAYGVTTPSAGGQANSLKSKALSNLRWRRVVLKISGAALTGSDNCNIDPKVAMLVSREVAIASRLGVEVSVLLIVLWTLLLCYPFQQLLIFQVAIVVGGRNFFSGDAWVNATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSVAMQEFAEPYNRHRAIRHLEKGRVVIFGGIGFGAGNPLFSTDIAAALRASELSAEAVLKGTNVDGVYDCNSRDNNFTFEHISFRELGSRGVTTMDMSALTFCEENAIPVVVFNLLEPGNISKALCGEQVGTLIDQTGAIS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02299 533 FunFam Aspartate/glutamate/uridylate kinase family protein 100 163 - -
Pste4g02299 533 MobiDBLite consensus disorder prediction 53 69 - -
Pste4g02299 533 Pfam Amino acid kinase family 272 506 IPR001048 -
Pste4g02299 533 Coils Coil 140 167 - -
Pste4g02299 533 Gene3D - 100 163 - -
Pste4g02299 533 Pfam Myb/SANT-like DNA-binding domain 97 187 IPR044822 -
Pste4g02299 533 Gene3D - 261 532 IPR036393 -
Pste4g02299 533 PANTHER URIDYLATE KINASE 93 532 - -
Pste4g02299 533 MobiDBLite consensus disorder prediction 1 95 - -
Pste4g02299 533 MobiDBLite consensus disorder prediction 7 23 - -
Pste4g02299 533 CDD AAK_UMPK-PyrH-Ec 271 527 IPR015963 GO:0005737|GO:0006221|GO:0033862
Pste4g02299 533 Hamap Uridylate kinase [pyrH]. 268 527 IPR015963 GO:0005737|GO:0006221|GO:0033862
Pste4g02299 533 FunFam Uridylate kinase 261 529 - -
Pste4g02299 533 SUPERFAMILY Carbamate kinase-like 334 526 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02299 Pste-Chr4 16510043 16514807 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02299 85 191 Trihelix Transcription Factor Family AT3G14180 36.697 1.17e-16 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pste4g02299 AA_kinase 5.3e-24 No_clan