Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02280 GAATGAGTTATAATAGTTGGATGAAGATGACACCTCACTGAATTAAATTGACCGGGAAGGAACCGAAACCCACTCTGGTTCTTTTCTTTCTCAAACCCCAAACCCAAACCCAAACCCCTTCTTCACATCTCTTTCTTTCATTTTCTCAAACACTTACACTGCGTCTTTATTCCTTCTCCTCTGTGTCTCTAATGGGAGACAAGCACCACCAAGACGACAGCAGCGATTTCACCTCCGAGGACGAAGGCACCGAGGATTACCGTCGCGGCGGCTACCACGCTGTCCGCATCGGCGACACCTTTAACGCCGGTCGCTACGTCATTCAGACCAAACTCGGTTGGGGCCATTTCTCCACTGTCTGGCTCGCTTGGGACACCAAACATTCTAGATATGTGGCTTTGAAAGTTCAGAAGAGTGCTCAGCACTACACCGAGGCGGCCATGGATGAGATAACCATTTTGCAACAGATTGCGGAGGGAGACCCTGACGATAAGAAATGTGTGGTGAAGCTTTTGGACCATTTCAAGCATTCTGGTCCCAATGGGCAGCATGTTTGCATGGTGTTTGAGTACCTTGGGGACAATCTTTTGACTCTTATTAAGTATTCGGATTATCGTGGCTTGCCTATCACCATGGTTAAGGAAATTTGTCTTCATATTCTGGTTGGATTGGATTACTTGCACAAGCAGCTTTCTATCATACACACTGACTTGAAGCCCGAGAACATCCTGCTATTGTCCATGATTGATCCGTCCAAGGATCCTAAGAAGTCTGGGGCGCCACTTATTCTTCCCAATAGTAAAGATAAGACGGCACTGGAGTCGGTGGGGATGAAAGATGCAAAGACTTTGAATGGGGATTTGGTTAAGAATCATAAGAAGAAGATTAAGAGAAAAGCTAAGCAAGCAGCCCATGGATGTGTTGAGAAGGAGGCTTCTGAAGCAGTTGAGAGTAATGCTGAAACCTCAGGGGCTGTGGAGTTGTCCCCAAATGCGAGTTCTGAAAGAGAACAGGCTTCTAGTTCTGCAGGAACTAGTAGGTTATCGGATGCTGATGGAACAAAGTTGAAAGAACAGAGTAACAAAAGAGGAAGCCGCTCAATGAGACAGAAGCTGCTTGCATCGGTTGATCTCAAGTGCAAGTTGGTGGACTTTGGTAATGCCTGCTGGACGTATAAACAGTTTACTAATGATATCCAGACAAGACAGTATCGGTGCCCAGAGGTGATCCTTGGATCAAAATATTCTACATCGGCAGATCTTTGGTCCTTTGCTTGCATTTGTTTTGAGCTTGCAACTGGAGATGTGTTATTTGATCCTCACAGTGGCGACAACTTTGATAGGGATGAGGACCACTTAGCATTAATGATGGAACTTCTTGGAATGATGCCACGTAAGATAGCACTAGGGGGGCGTTATTCCCGAGATTTCTTTAATAGATATGGTGACTTAAGGCACATCCGGCGGTTGCGATTCTGGCCCTTGAACAAAGTCCTCGTGGAGAAGTATGACTTTAGTGAGAAAGATGCAAGTGATATGACCGAATTTTTGGTTCCTATACTTGACTTTGTTCCTGAGAAGCGACCAACAGCAGGTCAGTGCCTTCTCCATCCATGGATCAATGTAGGTCCACGCCTTTTGGAGCCATCTGTGCCTTCCAATCACAACCCTGCCACTGAAACTGCTAGTTCGGACCAGAAGAAAAAGGATAAAGATGAGAGGGAGGCCATGGAGGCAGGAATGGGAAATATTGTTATCAATTCAGATTCTAAATTATTGATGCATTCTCCATCAAAGAGAGTCTTCCAAGGCAGCCAGAAGTCAATGCTGCCTTTGTCAATTGGTACCATTGACATGTTTGTGAACAGTGTTCATTATCATGTACTCTTGTGCTGA 1895 0.4544 MGDKHHQDDSSDFTSEDEGTEDYRRGGYHAVRIGDTFNAGRYVIQTKLGWGHFSTVWLAWDTKHSRYVALKVQKSAQHYTEAAMDEITILQQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYSDYRGLPITMVKEICLHILVGLDYLHKQLSIIHTDLKPENILLLSMIDPSKDPKKSGAPLILPNSKDKTALESVGMKDAKTLNGDLVKNHKKKIKRKAKQAAHGCVEKEASEAVESNAETSGAVELSPNASSEREQASSSAGTSRLSDADGTKLKEQSNKRGSRSMRQKLLASVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLNKVLVEKYDFSEKDASDMTEFLVPILDFVPEKRPTAGQCLLHPWINVGPRLLEPSVPSNHNPATETASSDQKKKDKDEREAMEAGMGNIVINSDSKLLMHSPSKRVFQGSQKSMLPLSIGTIDMFVNSVHYHVLLC 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02280 567 MobiDBLite consensus disorder prediction 238 252 - -
Pste4g02280 567 ProSiteProfiles Protein kinase domain profile. 42 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g02280 567 SUPERFAMILY Protein kinase-like (PK-like) 37 489 IPR011009 -
Pste4g02280 567 FunFam Serine/threonine-protein kinase SRPK-like protein 306 476 - -
Pste4g02280 567 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 9 508 - -
Pste4g02280 567 MobiDBLite consensus disorder prediction 1 21 - -
Pste4g02280 567 MobiDBLite consensus disorder prediction 287 301 - -
Pste4g02280 567 FunFam CMGC/SRPK protein kinase 28 127 - -
Pste4g02280 567 Pfam Protein kinase domain 42 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g02280 567 Pfam Protein kinase domain 309 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g02280 567 SMART serkin_6 42 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g02280 567 Gene3D Phosphorylase Kinase; domain 1 18 124 - -
Pste4g02280 567 CDD STKc_SRPK 31 476 - -
Pste4g02280 567 MobiDBLite consensus disorder prediction 486 511 - -
Pste4g02280 567 Gene3D Transferase(Phosphotransferase) domain 1 125 477 - -
Pste4g02280 567 MobiDBLite consensus disorder prediction 236 304 - -
Pste4g02280 567 MobiDBLite consensus disorder prediction 253 285 - -
Pste4g02280 567 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Pste4g02280 567 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02280 Pste-Chr4 16407880 16417519 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02280 9 527 EF-hand Containing Proteins AT5G22840 70.172 0.0 745
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Pste4g02280 Pkinase 1.7e-19 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02280 4 16407880 16417519 Pste4g02280 4 16407880 16417519 ECH