Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02273 ACAAAGCTAAAAAAACAACATAATCTTAACCATTTCCCCTTGGCAAAGAAAAAAGAAAAGTTAATACAGCAGCATATTGAGGCAATAATAACTATAGGCTTGAGACTTGATTTGTTACAGAGCACTGAAAAGGGTGGCATAGCAATTCAATTATTTATCATCATATTGATATCTCCCCAACAAAAAAAAAAAAAAAAAAAAAAACGAGGGAGAGAAAGAGAGAGAAGAAAGAAAATGCAGAAGCATGGTTTTGCATCAAAACGTAACGTGTTACCGTACCAGACGCCGAGACTAAGGGACCACTACGTTCTGGGGAAGAAACTGGGGCAAGGGCAATTCGGAACGACGTACCTGAGCACGCACAAGGTGACGGGGAAGCTGTACGCGTGCAAATCGATCCCAAAGAGGAAGCTTTTGTGTCAGGAGGATTATGATGACGTGTGGAGGGAGATTCAGATCATGCACCATTTGTCGGAGCATCCCAACGTTGTTCAGATACAGGGGACGTACGAGGATTCTGTGTTCGTGCACCTTGTGATGGAGCTGTGTGCTGGGGGTGAGCTTTTTGATAGGATCATTCAGAAGGGTCATTACAGCGAGAGAGAGGCTGCAAAGTTGATTAAGACCATTGTTGGTGTCGTCGAGGCCTGCCACTCTCTTGGTGTCATGCATAGGGATCTCAAGCCTGAAAATTTCTTGTTTGATACCCCTGGTGAAGATGCCCAGATGAAGGCCACTGATTTTGGCCTCTCTGTCTTCTACAAGCCAGGACAATCCTTTCATGATGTAGTGGGAAGTCCCTACTATGTTGCCCCCGAGGTGTTGTGCAAGCAATATGGACCGGAAGTGGATGTATGGAGTGCTGGTGTTATCCTATACATCTTACTCAGTGGGGTTCCACCTTTCTGGGCTGAAACCGAAGCTGGAATTTTCAGGCAGATTTTAAATGGAGATCTTGATTTTGTTTCTGAGCCATGGCCCAGTATCTCAGAAAATGCTAAAGAATTGGTTAAACAGATGTTGGACAGGGACCCTAAGAGAAGAATTTCTGCTCATGAAGTCTTGTGTAACCCTTGGATTGTTGATGATATTGCACCTGACAAACCTCTGGACTCTGCTGTTTTGACACGCCTAAAGCATTTCTCTGCAATGAATAAACTTAAGAAGATGGCATTACGGGTCATAGCAGAAAGACTTTCAGAGGAAGAAATAGGTGGATTGAAAGAGTTATTTAAAATGATTGACACAGACAATAGTGGGACAATAACTTTTGAGGAACTGAAGGCGGGTTTGAAAAGTGTCGGCTCTAATCTCATGGAATCTGAAATTAAATCCCTTATGGATGCGGCTGATATAGACAACAATGGAACAATAGACTATGGTGAATTTCTCGCTGCTACACTACACTTGAATAAGATGGAAAGAGAAGAGAATTTGATTGCTGCTTTTGGCTATTTTGATAAAGATGGTAGTGGATACATCACCATTGATGAGCTTCAACAGGCTACTAAAGACTTTGGCCTAGGCGATGTCCCTCTGGATGAGATGATCAAAGAGATTGATCAAGACAATGATGGGAAAATTGATTATGCAGAGTTTGCAGCAATGATGAAGAAGGGTGATTCAGATATTGGTAGAAGCAGAACCATGAAAGGCAATTTAAACTTCAGTATTGCAGAAGCATTTGGAGGAGGAAAGAAAATGTCTAAGGATAATGGTACATGGAAGTGCAAAAATGTGTTGCCGCATGAGACAGCGAATGTGAAGGAACACTATGTTATTTGTCAGAAGATACTGGGGAAAGGGGGTGTGGCGACAACATACATGTGCACGCATAAAGAGACAGGAGAGTATTATGCCTGCAAAACGATCCCAAAAGTGAAGCTGTTGAACCAGGGGGATTATGATGACGTGTGGAGGGAGATTCAGATCATGCACCATTTTTCGGGGCACCCGAATGTGGTTCAGATACAGGGAAGCTATGAGGACAAACTTGCTGTGCACTTGGTCATGGAGATGTGTATTGGGGGTGAGCTTTTTTATAGGATCATTCAGAAGGGGCATTACAGTGAGAGAGAGGCTGCAAAGATGATGAAGAAAATTGTTGGGGTGGTCGAGGCCTGTCACTCTCATGGGGTCATCCATAGGGACATCAAGCCTGAGAATTTCTTGTTTGATAGCTATTCTAAAAATGCCACCATCAAGGCCATTGATTTTGGCTACTCTACCTTCTACAAGCCAGGACAAACCTTTAGTGATGTAGTAGGAAGTGCCTACTATATGGCCCCCGAGGTCTTACGCAAGCAAAGTGGCCCACAAGTGGACGTTTGGAGTGCTGGTGTTATCCTATTCATCTTACTCAGTGGGGTCCCACCTTACTGGGCTAGTAATCATCCTAATCTCTATTTTAATTCTTTTCGACTGATACTTCAGCTCTCAAAAACCGAAGAAGGAATTTTCGATAAGATTTTACATGGAGAGATTGATTTTAATTCTGACCCGTGGCCAAGTATATCAGAAAGTGCTAAAGAATTATTAAAAAAGATGTTGGATAGGGATCCTAAGACTAGAATTTCTGCTCATAAAGTCTTATGTCACCCTTGGATTGTTGATGACAGTGTTGCTCCAGACAAACCTCTGGATCCTGTTGTTTTGACACGCCTAAAACATTTCTCAACAATGAATAAACTTAAGAAGATGGCATTACGTGTCATAGCAGAAAGACTCTCAGAGGAAGAAATAGGTGGATTGAAAGAGTTATTTAAAATCATTGATGAAGACAATAGTGGGACAATTACTTTTGAGGAACTGAAGGATGGTTTGAAAAATGTGGGATGTGATCTCATGGAATCAGAAATTAAATCCCTTATGGATGCGGCTGATATAGACAACAATGGGACAATAGACTATGGTGAATTTCTCGCTGCTACACTGCAGTTGAATAAAATGGAAAGAGAAGAGAATTTGGTTAATGCTTTTGTCTATTTTGATAAGGATGGCAGTGGTTACATCACCATTGATGAGATTCAACAAGCTTGTAAAGACTTTGGCCTTGGAAATATACATCTGGATGACATAATCATGGAGATCGATCAAGACAACGATGGGAGAATTGATTATGCAGAGTTTGTAGCAATGATGAGAAAAAGTGATCAAGATGCT 3162 0.4175 TKLKKQHNLNHFPLAKKKEKLIQQHIEAIITIGLRLDLLQSTEKGGIAIQLFIIILISPQQKKKKKKKRGRERERRKKMQKHGFASKRNVLPYQTPRLRDHYVLGKKLGQGQFGTTYLSTHKVTGKLYACKSIPKRKLLCQEDYDDVWREIQIMHHLSEHPNVVQIQGTYEDSVFVHLVMELCAGGELFDRIIQKGHYSEREAAKLIKTIVGVVEACHSLGVMHRDLKPENFLFDTPGEDAQMKATDFGLSVFYKPGQSFHDVVGSPYYVAPEVLCKQYGPEVDVWSAGVILYILLSGVPPFWAETEAGIFRQILNGDLDFVSEPWPSISENAKELVKQMLDRDPKRRISAHEVLCNPWIVDDIAPDKPLDSAVLTRLKHFSAMNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFEELKAGLKSVGSNLMESEIKSLMDAADIDNNGTIDYGEFLAATLHLNKMEREENLIAAFGYFDKDGSGYITIDELQQATKDFGLGDVPLDEMIKEIDQDNDGKIDYAEFAAMMKKGDSDIGRSRTMKGNLNFSIAEAFGGGKKMSKDNGTWKCKNVLPHETANVKEHYVICQKILGKGGVATTYMCTHKETGEYYACKTIPKVKLLNQGDYDDVWREIQIMHHFSGHPNVVQIQGSYEDKLAVHLVMEMCIGGELFYRIIQKGHYSEREAAKMMKKIVGVVEACHSHGVIHRDIKPENFLFDSYSKNATIKAIDFGYSTFYKPGQTFSDVVGSAYYMAPEVLRKQSGPQVDVWSAGVILFILLSGVPPYWASNHPNLYFNSFRLILQLSKTEEGIFDKILHGEIDFNSDPWPSISESAKELLKKMLDRDPKTRISAHKVLCHPWIVDDSVAPDKPLDPVVLTRLKHFSTMNKLKKMALRVIAERLSEEEIGGLKELFKIIDEDNSGTITFEELKDGLKNVGCDLMESEIKSLMDAADIDNNGTIDYGEFLAATLQLNKMEREENLVNAFVYFDKDGSGYITIDEIQQACKDFGLGNIHLDDIIMEIDQDNDGRIDYAEFVAMMRKSDQDA 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02273 1054 CDD EFh 917 976 IPR002048 GO:0005509
Pste4g02273 1054 Gene3D Transferase(Phosphotransferase) domain 1 188 366 - -
Pste4g02273 1054 ProSitePatterns EF-hand calcium-binding domain. 451 463 IPR018247 -
Pste4g02273 1054 ProSiteProfiles Protein kinase domain profile. 102 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g02273 1054 FunFam Calcium-dependent protein kinase 1 877 1051 - -
Pste4g02273 1054 FunFam Calcium-dependent protein kinase 5 679 877 - -
Pste4g02273 1054 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Pste4g02273 1054 CDD STKc_CAMK 591 868 - -
Pste4g02273 1054 SUPERFAMILY EF-hand 908 1049 IPR011992 -
Pste4g02273 1054 SMART serkin_6 593 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g02273 1054 SMART serkin_6 102 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g02273 1054 SUPERFAMILY Protein kinase-like (PK-like) 590 886 IPR011009 -
Pste4g02273 1054 ProSiteProfiles Protein kinase domain profile. 593 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g02273 1054 ProSitePatterns EF-hand calcium-binding domain. 1031 1043 IPR018247 -
Pste4g02273 1054 ProSiteProfiles EF-hand calcium-binding domain profile. 984 1019 IPR002048 GO:0005509
Pste4g02273 1054 ProSitePatterns Serine/Threonine protein kinases active-site signature. 713 725 IPR008271 GO:0004672|GO:0006468
Pste4g02273 1054 FunFam Aurora kinase A 585 677 - -
Pste4g02273 1054 Pfam EF-hand domain pair 407 467 IPR002048 GO:0005509
Pste4g02273 1054 Pfam EF-hand domain pair 987 1048 IPR002048 GO:0005509
Pste4g02273 1054 Pfam EF-hand domain pair 477 538 IPR002048 GO:0005509
Pste4g02273 1054 SUPERFAMILY Protein kinase-like (PK-like) 98 376 IPR011009 -
Pste4g02273 1054 Pfam EF-hand domain pair 929 977 IPR002048 GO:0005509
Pste4g02273 1054 ProSitePatterns EF-hand calcium-binding domain. 487 499 IPR018247 -
Pste4g02273 1054 FunFam Calcium-dependent protein kinase SK5 270 365 - -
Pste4g02273 1054 SUPERFAMILY EF-hand 398 538 IPR011992 -
Pste4g02273 1054 Gene3D Phosphorylase Kinase; domain 1 103 187 - -
Pste4g02273 1054 Gene3D Phosphorylase Kinase; domain 1 594 679 - -
Pste4g02273 1054 FunFam CDPK-related kinase 3 94 262 - -
Pste4g02273 1054 Pfam Protein kinase domain 102 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g02273 1054 Pfam Protein kinase domain 597 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g02273 1054 CDD EFh 407 466 IPR002048 GO:0005509
Pste4g02273 1054 ProSitePatterns EF-hand calcium-binding domain. 925 937 IPR018247 -
Pste4g02273 1054 ProSitePatterns Protein kinases ATP-binding region signature. 108 131 IPR017441 GO:0005524
Pste4g02273 1054 ProSitePatterns EF-hand calcium-binding domain. 415 427 IPR018247 -
Pste4g02273 1054 ProSiteProfiles EF-hand calcium-binding domain profile. 513 543 IPR002048 GO:0005509
Pste4g02273 1054 FunFam Calcium-dependent protein kinase 1 367 541 - -
Pste4g02273 1054 ProSiteProfiles EF-hand calcium-binding domain profile. 402 437 IPR002048 GO:0005509
Pste4g02273 1054 PANTHER SERINE/THREONINE-PROTEIN KINASE 85 533 - -
Pste4g02273 1054 ProSiteProfiles EF-hand calcium-binding domain profile. 948 983 IPR002048 GO:0005509
Pste4g02273 1054 ProSiteProfiles EF-hand calcium-binding domain profile. 474 509 IPR002048 GO:0005509
Pste4g02273 1054 Gene3D Transferase(Phosphotransferase) domain 1 680 874 - -
Pste4g02273 1054 ProSiteProfiles EF-hand calcium-binding domain profile. 438 473 IPR002048 GO:0005509
Pste4g02273 1054 ProSitePatterns EF-hand calcium-binding domain. 997 1009 IPR018247 -
Pste4g02273 1054 Gene3D - 367 543 - -
Pste4g02273 1054 Gene3D - 877 1053 - -
Pste4g02273 1054 FunFam Calcium-dependent protein kinase 1 104 187 - -
Pste4g02273 1054 CDD STKc_CAMK 101 359 - -
Pste4g02273 1054 ProSitePatterns EF-hand calcium-binding domain. 521 533 IPR018247 -
Pste4g02273 1054 ProSiteProfiles EF-hand calcium-binding domain profile. 1022 1053 IPR002048 GO:0005509
Pste4g02273 1054 ProSiteProfiles EF-hand calcium-binding domain profile. 912 947 IPR002048 GO:0005509
Pste4g02273 1054 SMART efh_1 952 980 IPR002048 GO:0005509
Pste4g02273 1054 SMART efh_1 1022 1050 IPR002048 GO:0005509
Pste4g02273 1054 SMART efh_1 988 1016 IPR002048 GO:0005509
Pste4g02273 1054 SMART efh_1 478 506 IPR002048 GO:0005509
Pste4g02273 1054 SMART efh_1 512 540 IPR002048 GO:0005509
Pste4g02273 1054 SMART efh_1 442 470 IPR002048 GO:0005509
Pste4g02273 1054 SMART efh_1 406 434 IPR002048 GO:0005509
Pste4g02273 1054 SMART efh_1 916 944 IPR002048 GO:0005509
Pste4g02273 1054 MobiDBLite consensus disorder prediction 63 83 - -
Pste4g02273 1054 ProSitePatterns EF-hand calcium-binding domain. 961 973 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02273 Pste-Chr4 16377540 16387852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02273 89 563 EF-hand Containing Proteins AT4G09570 82.983 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pste4g02273 Pkinase 5.4e-72 CL0016