Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02225 CAAAATCCGCACCAGCTCCTTCCATCTTAGTGAGCTGTTCAGTTACTGACTTAGGAGTGGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTCAAACTCGTGGACCCCTTTTCTCCAACCTCCCCTTCTCATTTCTCAATCATCCAAAACCCTACCGATTCCCATGTCCACTTCTTCCTCTTCCTAATCCCTCGATTTCCTCACCATGGATTCCGAATACCACTCCTCCAAACCCCGATTTAACGGCTACCTCGTTTACACTCGCCGAAAGCGCACCCTCCATTCCGATAATGCCGCCCCCAAGCGCCTCAAAACTTCCCACCCCCACGACGTCGTTTTCAAGCGCCCCAAATCCCAAGACGCCGCTTCCCACCAATTAACCCTTCCCGACACTAAGAAGATCATCGTCGTCAACAAGAAGCCCGTCACCGTCAAGGAGCTCTTCGAAACCGGCTTGCTCGACGGCGTTCCCGTCGTTTACGTCGGTTGCAAGAAGGATTCTACATCGGAATTGCGGGGTGTAATTAAAGATGGGGGGATCTTGTGCTCGTGCTGTTTGTGCAATGGACTCAGGGTTATTCCACCTTCCCAATTTGAGATTCATGCATGCAACATATATAAGAGGGCAGCACAATATATTTGCCTTGAAAATGGGAAGAGCCTACTTGAACTATTGAGAGCATGCAGGGCAGCTCCGCTACATACTTTGGAGGCAACCATTCAAAATTTTATTAATTCTCCGCCTGAGGAAAAATATTTTACTTGCAAAAGTTGCCGAGGGTGTTTCCCTGCTTCCAATGTGGAAAGAGTGGGGCTTCTATGTCTATCTTGTGTGGAATCAAGGAAATCTGAAAAGAGTTCTATTCATGCTGTTGGCAAAAGAGTCAGGTCTCCTCGGCCAGTATTATTCTCCCGTTCATGTTCATGCTGTACTTCTGAACTGTGTATCTCTCCTCAAACTAAGAAATGGAAGACTAGAACAAAGTCATCTAAACTCTCGGTAAAACTGAAGACTTCACCTATTACTTCAAAGTGTTTATCTCCACAAAATAAAAGTCAGTGGAGGATCTCTAAAAGGCATCAACGATTGCATAAATTAATTTTTGAAGAGGATGGATTGCCTAATGGAGCTGAAGTTGCTTATTATGCACGTGGACAGAAATTGCTTGAGGGTATCAAAACACGCTCTGGAATTGTCTGTCGATGCTGCAACACTGAGATCAGCCCCTCACAGTTTGAGGTCCATGCAGGCTGGGCTTCTCGCAGGAAACCTTATGCATACATCTACACATCAAATGGGGTGTCACTCCATGAGTTGGCAATATTTCTCTCAAAAGATCACAAATGCACTACAAAGCAGAATGATTATGTTTGTGCTGTTTGCTGGGATGGTGGAAACCTCTTTCTTTGTGATGGATGTCCAAGGGCATTTCATAAAGAATGTGCATCTGTATCAAGTATTCCCCGGGGTGAGTGGTACTGTCAAATTTGTCAACACACGTTCCTCAGAGAAAGGCCGGTGTTATACAATGCCGATGCTGTGGCAGCCGGAAGGGTAGAAGGTGTTGATCCTATTGAGCAGATTGCCAAGAGATGCATTCGCATAGTAAAAGACATAGGAGCTGAGATTGGTGGATGTGTTTTATGCAGGTGTTCTGACTTCAGCAGATCAGGATTTGGTCCTCGCACAATTATAATCTGTGATCAGTGTGAAAAGGAATATCACGTTGGCTGCTTGAGGGATCATAAGATGGCATATTTGAAGGAGTTGCCAGAGGGGGATTGGTTTTGTTGCGATGATTGCTCAAGAATACATTCAACTTTGGAGAATCTCCTGGTTAGGGTGGCTGAGAGACTACCTGAAGCTCTTTTGGATGTTATAAAGAAGAAGCAAGTGGAAAGATGTTTAGAACCCCTTAATGAGATTGATGTAAGATGGAAACTTATTAATGGAAAAATTGCGTCTCCCGAAACTAGGCCATTGCTTTTGGATGCAGTGTCCATGTTTCATGAATGCTTTGATCCTATAGTTGATCCAGCTGCTGGACGTGACCTTATTCCTGCCATGGTTTATGGAAGGAATTTGCAGAATCAGGATTTTGGAGGAATGTATTGTGCATTATTGATTGTCAATTCATCTGTGGTATCTGCGGGCATGGTTCGAATTTTTGGTAGAGATATTGCCGAACTCCCTTTAGTTGCTACAAGATATAAGAACCGTGGAAAGGGCTACTTCCAAACTCTTTTCTCGTGCATTGAGAGGCTGCTGGCTTTCATGAATGTTAAAAATCTTGTGCTACCTGCTGCGGAAGAAGCAGAATCTATATGGACAGAAAAATTCGGATTTAGCAAGATGAAACCCGACCAGCTTACCAACTATAGAATGAACTGCCATCAAATTATGGCATTCAAAGGGACAATTATGCTTCATAAAACGGTGCCTCGATATACATGGAAATATAATGTTTAG 2479 0.4413 MDSEYHSSKPRFNGYLVYTRRKRTLHSDNAAPKRLKTSHPHDVVFKRPKSQDAASHQLTLPDTKKIIVVNKKPVTVKELFETGLLDGVPVVYVGCKKDSTSELRGVIKDGGILCSCCLCNGLRVIPPSQFEIHACNIYKRAAQYICLENGKSLLELLRACRAAPLHTLEATIQNFINSPPEEKYFTCKSCRGCFPASNVERVGLLCLSCVESRKSEKSSIHAVGKRVRSPRPVLFSRSCSCCTSELCISPQTKKWKTRTKSSKLSVKLKTSPITSKCLSPQNKSQWRISKRHQRLHKLIFEEDGLPNGAEVAYYARGQKLLEGIKTRSGIVCRCCNTEISPSQFEVHAGWASRRKPYAYIYTSNGVSLHELAIFLSKDHKCTTKQNDYVCAVCWDGGNLFLCDGCPRAFHKECASVSSIPRGEWYCQICQHTFLRERPVLYNADAVAAGRVEGVDPIEQIAKRCIRIVKDIGAEIGGCVLCRCSDFSRSGFGPRTIIICDQCEKEYHVGCLRDHKMAYLKELPEGDWFCCDDCSRIHSTLENLLVRVAERLPEALLDVIKKKQVERCLEPLNEIDVRWKLINGKIASPETRPLLLDAVSMFHECFDPIVDPAAGRDLIPAMVYGRNLQNQDFGGMYCALLIVNSSVVSAGMVRIFGRDIAELPLVATRYKNRGKGYFQTLFSCIERLLAFMNVKNLVLPAAEEAESIWTEKFGFSKMKPDQLTNYRMNCHQIMAFKGTIMLHKTVPRYTWKYNV 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02225 754 ProSiteProfiles Zinc finger PHD-type profile. 387 432 IPR019787 -
Pste4g02225 754 Pfam Tify domain binding domain 324 373 IPR032308 -
Pste4g02225 754 Pfam Tify domain binding domain 105 160 IPR032308 -
Pste4g02225 754 SUPERFAMILY FYVE/PHD zinc finger 385 433 IPR011011 -
Pste4g02225 754 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 376 453 - -
Pste4g02225 754 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 474 536 - -
Pste4g02225 754 SUPERFAMILY FYVE/PHD zinc finger 474 535 IPR011011 -
Pste4g02225 754 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 375 452 IPR013083 -
Pste4g02225 754 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 629 718 IPR016181 -
Pste4g02225 754 PANTHER AUTOIMMUNE REGULATOR 47 744 - -
Pste4g02225 754 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 476 536 IPR013083 -
Pste4g02225 754 SMART PHD_3 480 534 IPR001965 -
Pste4g02225 754 SMART PHD_3 389 430 IPR001965 -
Pste4g02225 754 ProSitePatterns Zinc finger PHD-type signature. 390 429 IPR019786 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02225 Pste-Chr4 16113920 16125753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02225 1 748 PHD Transcription Factor Family AT2G36720 48.363 0.0 752
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02225 4 16113920 16125753 Pste4g02225 4 16113920 16125753 ECH
Pste5g02128 5 13789983 13798520 Pste4g02225 4 16113920 16125753 PCT