Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02186 CCAAAATATCCTATTTCCTCTGTTTTCCCCTGTCTCTCGCAAAAACACAATGGAGTACAAAGTGAAAACCACACCAACAACACCTTCTCAACCAATCCCAATCCATGTTCCCACTATGCTCTCAAACTCTCCTCCATCTTCATCTTCTTCACCTCCCACACCATTCCCTTCACCCTCTCAGGGCTCTCCCTCTGCTGCTGCTGCTGCTCCACCGTCTCCGCCGCCACCGGTGGTGGTTAGCCCTTGTGCAGCTTGCAAGATCCTCCGCCGCAGGTGCGTCGAGAAGTGTGTCTTGGCTCCTTATTTCCCTCCCACTGACCCTCTCAAGTTCACCATTGCTCATAGAGTCTTTGGAGCCAGCAACATCATCAAGTTCCTGCAGGAACTGCCAGAATCCCAGAGAGCAGATGCTGTAAGCAGCATGGTTTATGAGGCAAATGCTAGGATCAGAGACCCAGTTTATGGGTGTGCAGGTGCAATATGCCAACTTCAAAAGCAAGTTAGTGAGCTACAAGCGCAATTGGCCAAAGCACAAGCTGAGCTAGTGAACATGCAGTGCCAACAAACCAATTTAGTGGCCTTAATTTGCATGGAAATGAGTCAATCACAGGAGCAGCTCATGCTTCAGCCTCAACCTCACGTTGATATGAGCTGCTTCATAGAGGACAACACTTTTGGGACTGCTTGGGAGCCTCTTTGGACATGAAATTAATGAATGTTATTTATATAATATGTATCTTAGATATTTGCAATAGAGAGAGATTAATTTGTTCTATAGTAACTGGTAAAACTTTCAACCTCCCAAGTAGAGGAAGAGATAATGAAAATTATACTCAGGGAATCCAATTTCAATAAAGTCATTAATTAGTTAT 872 0.4507 MEYKVKTTPTTPSQPIPIHVPTMLSNSPPSSSSSPPTPFPSPSQGSPSAAAAAPPSPPPPVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAELVNMQCQQTNLVALICMEMSQSQEQLMLQPQPHVDMSCFIEDNTFGTAWEPLWT 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02186 218 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 64 186 - -
Pste4g02186 218 Pfam Lateral organ boundaries (LOB) domain 65 162 IPR004883 -
Pste4g02186 218 ProSiteProfiles LOB domain profile. 64 165 IPR004883 -
Pste4g02186 218 MobiDBLite consensus disorder prediction 1 30 - -
Pste4g02186 218 Coils Coil 144 171 - -
Pste4g02186 218 MobiDBLite consensus disorder prediction 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02186 Pste-Chr4 15853770 15855315 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02186 61 218 AS2 family AT1G07900 71.779 1.28e-78 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pste4g02186 LOB 2.6e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02186 4 15853770 15855315 Pste4g02186 4 15853770 15855315 ECH