Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02181 GCTGATTGGGATAAAGGCCTTGCATGTGTTTTGCTTCTTCTTCTGCACTATACCTTTTTAAGTTTTTCTGAAATGAGAGAGGGGCTGAGATCGCGGGCTCGATTGGGGGCGGTTTCTGTTGGCGAAGCCGAAGGAGTTGTTCGGAAGAAAAAAGTTGGTGTGAAGAGAGAGGCTGTTGATTTGGGTGATGAGGGTTTGGAGGCGCAGGACTCAACGATTGAGAAGAAGGAGGAAGTTGAATGTGATGTAAAACAAAAATGTGGCTTTGATTTGAATGCGATTCCTAGTGGTGAGGCTGACTTGGATGAGAATGGGAGTGGTAGAAGTTGTTTTAGTGGTGGGGGTAGTATTGTTGTAGCTGAGGTAGACAGGATGGCAAAGAAGGAGCATGCTTCAAATGATGAAGTATTGTTTAGTGGTCGAGTGTTGCGCTCAAGGTCAAAGAGGGGGATTGATAGAAGATTGTATAATGAAGATAATGATGGTGCCTTCTCTGAAGATGATGGAGAGCATGGGTGCGTGAGGAAGAAAATTAAGAAGGAATATGAAGAATCTGATGAATTTTTGCCTGATAGTTGTGAGGATGAAATGGTTAAGGTGAAGAAGGCAGGGAATGGCAGGAGGAAGTTGAAAGGGAAGCGTGGCCGGCCTCCCAAAATAGTTTTGAAAGAGGAAGATCAAACAGTTAATCAGTTGCCTCGTAAGCGTGGAAGACCACCGTTGGCTGCTGGCCGACAAAACCATCTTAATAGAAAAGGAAAGTTGACCCTTCTAAAAAGAAGAGAAGGTTTAACTAAGGTGAATGCAGTTGATGATCCAAATTCAAGGAAGTCTGCTGTGGATGAGTTAGAAAAGAAGGAAGTTTCTTCCGTCAAGAAGAATAACTTTAGTGACAACGATGTGGTGGCCTCACCATTAATATCAAATACTGAGAATGCACTTGTCAATGAGAAAAGTGGAAAAGAAGGGTTAACTATGAGAGTTGGTGCTAAGGTGAATGCAATTGATGATTTAAATTTAAGGAAGTCTGCTGGGGATGAGTTAGAAAAGAAGGAAGTTTCTTCTGCCAGGAAGAATAAATTTAGTAAGGTTTTGAAAACTGACAACAATGTCGTGGCCTCACCATTAGGATCAAATACTGAAAATGCACTTGTCACCGAAAAAAATGGAAAAAATAAAGCAAAACAGTTAGTGAGGGATCAAATAAAGGAACTGCTCTCAGCTGCAGGATGGACAGTTGACTATAGACCTAGGAATGGCAGAGAGTACCATGATGCAGTTTATGTCAGTCTGGATGGACACACACACTGGTCAATCACCTTGGCTTACAACAGGCTTAAACAGTATTATGAAGCTGGTGATGGTGAAGGTAAGATGTATCATCCAGGCTTTAAATTTACACCAATTGCACAAGAGGATTTCAAAACACTGACTAAGGTAATTAACAAGCAAAGAAAAAATAAAGATAAACTTGCACCAAAAGTGGGAAAGGGTGGAAAGAAAGTGGATGGAGTCAATGGTAAAAAGAACAAAGAAAAGTCAGGTTCTGGTGCAGGCATGGGTAAGTCAAAGAAGAGGAAAAGGAAATGGTCACTTGGAAACACAGATGGTACATCCCCTAAGAGGATGTCAGTTCTTGTGAGGGATCATAAACGAAACAAATCACAAAACAAGAAGCGATGTGCTCCGTTGGCTCGCAATGCTGAAGAGATAGATTCAGAAACTGAGGGGTATGTACTTTACAATGGAAAACGAACTTTGCTTGCCTGGATGATTGATTTAGGCACTGTCCCTCAAAATGGGAAGGTTCATTATATGTCAGAAAAAAGTAAAGGTGCAATACTTGATGGTAATATCACAGGAGATGGCATTCATTGTGGTTGCTGTGATAAAATTGTTACAATTTCAGACTTTGAAGTTCATGCAGGAAGCAACCTTGCTGATCCACTTAAAAATATATATGTGGAGGAAGGAACTTCCCTTTTACAATGTTTGCTAGATTCATGGAATAAACAAGATGATTCTGAACGTGAAGATTTTCATTTTGTTGATGTTGCGGGTGAAGATCCAAATGATGATACATGTGGGGTCTGTGGAGATGGTGGAGACCTGATATGTTGTGATGGTTGCCCATCAACATTCCATCAAGGCTGCTTGGAGATAAAAAAATTTCCATCTGGTGACTGGCACTGCATTTATTGCTGTTGCAAGTTTTGTGGGTCAGTTAGTGGAAGTTCAGACCAAAGGGATGGCAATGATGAGCTCACTGTGTCAAAATTATTCACATGCCAATTATGTGAGGAAAAATATCACAATACCTGTATTGAGGCAGATGATGCCAATACTGATGATTCCAGGGATGTCTTCTTTTGTGGAAAAAGATGTCAAGAGTTGTCTGAGAGACTTGTAAAGATCCTAGGGGTTAAACATGAAATGGAAGATGGGTATTCTTGGACTTTTATTCGTAGGTCAGATGTTGGATCTGATGCTTCACAGATAAAACCTCAGATGGTTGAATGTAATTCTAAGTTGGCTGTTGCATTATCAATAATGGATGAGTGCTTCATGCCATATATTGATCATAGAAGTGGGATCAATCTGATCCACAATATTCTGTATAATCGTGGGTCAAATTTCAATCGTCTGAACTATAGTGGATTTATTACTGCAATTCTAGAGAGAGGTGAAGAGATAGTATGTGCTGCATCTATCAGGATCCGTGGGAACCAACTAGCAGAGATGCCATTCATTGGGACCCGCTATATGTACAGGCGGCAAGGACTGTGCCGCCGGCTTCTTAATGCCATTGAACTGGGACTCAGCTCTTTAAATGTTGATTTATTGGTCATACCCGCTATCTCAGAACTCAGAGAAACTTGGACTTCTGCTTTTGGGTTCAAACCACTTGAATCAACAAACAAACAAATTACACTCAATAAAAATTTGTTGGTATTTCCTCATGTAGATATGTTACAGAAGAAGATATCAAAACATAAATTGGATGATCAAAATCTGATTCCTTCAGAAGCTTTCAATCCTAAAGGGAATCAAATAGCAAATAACTGTGATGGAGTGGGCTCATCTGGGTCTGATTTGAGTGAGACTCCTCCCTCTAATGCATGCCAGATAAATGGTGAAACTGGATCCATTGAATCTGATTGTCATCTTCCTGAGGGTCCATTGAATAATGTACCTGACATTGCTAGCAATGATGAAGATCATAAAAAATCTGCAAAAGATGACACATGTCAAGTTTTATGTCAGACAGTTCATGAAAATTTGGTGATGGAAGACAACACCAGTGTTGAAAATGCCTGTGATAACGTGACTGACACTTGTTGCCAAGCAGGAGATAGCCAGTTGAACAATTGCCTGATTCCTAATGAGAGACTGTGTCTCTCATGTTGCATTAACACTGAGGCTACAGAAGGACATTGTGGCAGTGTTTCGTTGGAGGTTACTGAAAACTTTTCCAATCAGGTTAAAGTAGCAAATGAAGTTATTTCAAATAACACTGCTGAAAACTCTGCACCCTGCGGTGCAGAATGTATTCCTCTTGACTCTCAAATTGCATTTGGTACAAGAGATTCAAAAGATTCTGCTGATTCTATTCTCCATGATTCATGTAAAATCTCTGACAGTTGTGTACTGGGAAGCACGACTAATTGTGGTCAACTGAACTTTATTGGAACAGAAGTACATGCTGAATCTGCTGGTGTTTGCGATTTTGATTCTAGACCCAAGGGTGATTGTGCCTCTGGTGAAGCTGATTCTTCCACAAACAACGTCTTAATGCACCTAAGATCTCAAAACATCACAGAGCTAGCCGAGCCTGATTTGGAGGTTGATCAAACTGCACGGAATGCTCCCTCAATGTGGAGCCCAAACACTGCTTCTGGTGTGGCTCTTCACTGGGCATCTACTGGCAGTGCTTCACGTGGTAGTACTGAAGGGATAGTTTTGTCAAACCAAGCCAGTTGATTTGTTTCCATTTGTTGCTAAGTAGGTTATATTTTAGGGGGGGTATTCACTAACAAAGGGAATCTAGCAGTGCAATCTGGAAGGGGTTACAGTAAAGTCCATGGTCTTTTGTACTTAAGGATGGGCGAGATTGTATGTGTATTTGAAAAAGGGTAGGTCTTAGAATAGGGTGATCTTCCTTCTGATTGTTCAATAGAACAATTATTGTTTCTTAAAAATCTTATTGGGAATGTTAGATTCCCTTATTTGGCATTAATTTTTTTAAAAACATTTTTAGGAACCATCTTTTCTAAATATTTCTGTTAATTATGTTTCTCAACAAAACATTGTCATGGGAGGTGTGAACATTAGAGAATCTGTCAGCCATGTTTATGATAATATTTGTAAGAAACCTTTAAATTAAACAACTTAGTAAAGTTTATAGCGATTAAAA 4414 0.3994 ADWDKGLACVLLLLLHYTFLSFSEMREGLRSRARLGAVSVGEAEGVVRKKKVGVKREAVDLGDEGLEAQDSTIEKKEEVECDVKQKCGFDLNAIPSGEADLDENGSGRSCFSGGGSIVVAEVDRMAKKEHASNDEVLFSGRVLRSRSKRGIDRRLYNEDNDGAFSEDDGEHGCVRKKIKKEYEESDEFLPDSCEDEMVKVKKAGNGRRKLKGKRGRPPKIVLKEEDQTVNQLPRKRGRPPLAAGRQNHLNRKGKLTLLKRREGLTKVNAVDDPNSRKSAVDELEKKEVSSVKKNNFSDNDVVASPLISNTENALVNEKSGKEGLTMRVGAKVNAIDDLNLRKSAGDELEKKEVSSARKNKFSKVLKTDNNVVASPLGSNTENALVTEKNGKNKAKQLVRDQIKELLSAAGWTVDYRPRNGREYHDAVYVSLDGHTHWSITLAYNRLKQYYEAGDGEGKMYHPGFKFTPIAQEDFKTLTKVINKQRKNKDKLAPKVGKGGKKVDGVNGKKNKEKSGSGAGMGKSKKRKRKWSLGNTDGTSPKRMSVLVRDHKRNKSQNKKRCAPLARNAEEIDSETEGYVLYNGKRTLLAWMIDLGTVPQNGKVHYMSEKSKGAILDGNITGDGIHCGCCDKIVTISDFEVHAGSNLADPLKNIYVEEGTSLLQCLLDSWNKQDDSEREDFHFVDVAGEDPNDDTCGVCGDGGDLICCDGCPSTFHQGCLEIKKFPSGDWHCIYCCCKFCGSVSGSSDQRDGNDELTVSKLFTCQLCEEKYHNTCIEADDANTDDSRDVFFCGKRCQELSERLVKILGVKHEMEDGYSWTFIRRSDVGSDASQIKPQMVECNSKLAVALSIMDECFMPYIDHRSGINLIHNILYNRGSNFNRLNYSGFITAILERGEEIVCAASIRIRGNQLAEMPFIGTRYMYRRQGLCRRLLNAIELGLSSLNVDLLVIPAISELRETWTSAFGFKPLESTNKQITLNKNLLVFPHVDMLQKKISKHKLDDQNLIPSEAFNPKGNQIANNCDGVGSSGSDLSETPPSNACQINGETGSIESDCHLPEGPLNNVPDIASNDEDHKKSAKDDTCQVLCQTVHENLVMEDNTSVENACDNVTDTCCQAGDSQLNNCLIPNERLCLSCCINTEATEGHCGSVSLEVTENFSNQVKVANEVISNNTAENSAPCGAECIPLDSQIAFGTRDSKDSADSILHDSCKISDSCVLGSTTNCGQLNFIGTEVHAESAGVCDFDSRPKGDCASGEADSSTNNVLMHLRSQNITELAEPDLEVDQTARNAPSMWSPNTASGVALHWASTGSASRGSTEGIVLSNQAS 1326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02181 1326 ProSiteProfiles Zinc finger PHD-type profile. 692 737 IPR019787 -
Pste4g02181 1326 PANTHER PHD FINGER PROTEIN 12 373 1122 IPR042163 GO:0003714|GO:0045892
Pste4g02181 1326 SMART PHD_3 736 796 IPR001965 -
Pste4g02181 1326 SMART PHD_3 694 735 IPR001965 -
Pste4g02181 1326 MobiDBLite consensus disorder prediction 484 510 - -
Pste4g02181 1326 CDD NAT_SF 891 937 - -
Pste4g02181 1326 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 684 756 IPR013083 -
Pste4g02181 1326 SUPERFAMILY FYVE/PHD zinc finger 687 739 IPR011011 -
Pste4g02181 1326 MobiDBLite consensus disorder prediction 484 561 - -
Pste4g02181 1326 Pfam Tify domain binding domain 617 666 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02181 Pste-Chr4 15829389 15838290 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02181 374 1002 PHD Transcription Factor Family AT5G36670 45.468 0.0 587
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02181 4 15829389 15838290 Pste4g02181 4 15829389 15838290 ECH