Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02169 ACAAAGGAACGACACATGGGGAGGAAAGGGGGTTGGTTGTCTGCAGTGAAGAAAGTTTTTGTTTCTGATTCCAAAAAGGAACAGTTAGCATGTTTTGGGTCTCATCATTATGAGGACCTGGATATGGCTCCTGAAGGAGCACCAATTGTAGTTGTTCCCTCTCTTCCACCTAGAAAAGACATTCACCCAAGAAGTGAGGTAGAGAATGAACAGAGCAAACAAGCCTTTTCTATGGTTTTGGCCACTGCTGTGGCTGCAGGTGCTGCTGTTGCTGTAACTGCAGAGGTTGCTCGTCTCGCAAACACGCCTCGTTCCAATGGAAAAGTCAATCAAGAAATGGCAGCTATCAAGATTCAAACAGTGTACCGTGGATATTTGGCAAGAAGATCCTTACGTGGCTTAAGAGGTTTGGCGAGGTTGAAAACATTGGTGCAGGGACAATCTGTTCAAAGGCAAGCAGCTACTACATTACAATGCATGCAAACTCTTTCTCGTTTGCAGTCTCAGATTCGTGCACGGAAAGTTAGAATGTCTGAGGAGAATCAGGTTCTTCAACGGCAAATGCAACAAAAACGTGAAAAAGAACTGGACAAGTCGCAAAATTATATTGGAGAAAAATGGGATGATAGCTCAAAATCAAAGGAGCAAGTTGAAGCAAAGTTGTTGAATAGACAAGTAGCAGCTATGAGAAGAGAGAAGGCTTTGGCCTATGCATCTACACATCAGCAAACATGGAAGAACTCTACAAAATCTGCTACAAATGCCACATTCATGGATCCAAACAATCCCCATTGGGGTTGGAATTGGCTAGAGCGATGGATGGCTGCAAGGCCTTGGGAGGGCCAAACCACTACGTACCACATTGGACATGCATCTGCCAAGAGTGTTACAAGCAACACCATGTCAATTGGTGAAATCACAAAATTGTATTCTCTCCGTGATCAGAACAATGATGTCAAAAACTCCCCAACAAACCAAAAATCAACACGTCCTCGCAGTAGCCATAATTCTCCTCCAAAAATAGCCTCAAGGCCCCCACCTGCCAATGTAATAAAATCAAAGTTATCTACAAGTTCAAAGGGTGGTTCATGGGGTGGATCAGGTGACATAAAAAGCACGTTTAACAAAAACTTAGAAAACAATCGCAGACATAGCATTGGAGTGTCTCCAGTGAGAGATAATGAGAGTAACTCAAGCTCATCACCTGCTTTTCCAAATGTCACAACACCATCCACAAAGGTTGCAACAAAGGCTAAACCATCATCATCCAAAGTTAAAAGTACGTCATTTGGTGTACAAAGAAATGGAACAACTGAAAAAGCAGCTTCTGCTCCTCTAAAGAAGAGGCTTTCTTTCCCTGCTTCTATTACGGGTACAAGAAGGTATTCTGTTTCAACTAGGCCAGGAAATGTAGCTTCCAACAAGAGCGTTTCCAATGCTACCATTCCTGAGGAGAAGGTGAAAGTGAGAAATGGAGGGGGGAGGTAGAGATGCATCATGCATGCCATTGATGTACTTAGAATAGAATT 1529 0.431 TKERHMGRKGGWLSAVKKVFVSDSKKEQLACFGSHHYEDLDMAPEGAPIVVVPSLPPRKDIHPRSEVENEQSKQAFSMVLATAVAAGAAVAVTAEVARLANTPRSNGKVNQEMAAIKIQTVYRGYLARRSLRGLRGLARLKTLVQGQSVQRQAATTLQCMQTLSRLQSQIRARKVRMSEENQVLQRQMQQKREKELDKSQNYIGEKWDDSSKSKEQVEAKLLNRQVAAMRREKALAYASTHQQTWKNSTKSATNATFMDPNNPHWGWNWLERWMAARPWEGQTTTYHIGHASAKSVTSNTMSIGEITKLYSLRDQNNDVKNSPTNQKSTRPRSSHNSPPKIASRPPPANVIKSKLSTSSKGGSWGGSGDIKSTFNKNLENNRRHSIGVSPVRDNESNSSSSPAFPNVTTPSTKVATKAKPSSSKVKSTSFGVQRNGTTEKAASAPLKKRLSFPASITGTRRYSVSTRPGNVASNKSVSNATIPEEKVKVRNGGGR 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02169 495 ProSiteProfiles IQ motif profile. 111 139 IPR000048 GO:0005515
Pste4g02169 495 SMART iq_5 110 132 IPR000048 GO:0005515
Pste4g02169 495 MobiDBLite consensus disorder prediction 390 440 - -
Pste4g02169 495 PANTHER IQ-DOMAIN 5-RELATED 6 457 - -
Pste4g02169 495 Coils Coil 174 194 - -
Pste4g02169 495 Coils Coil 212 232 - -
Pste4g02169 495 MobiDBLite consensus disorder prediction 350 384 - -
Pste4g02169 495 MobiDBLite consensus disorder prediction 314 339 - -
Pste4g02169 495 MobiDBLite consensus disorder prediction 456 481 - -
Pste4g02169 495 MobiDBLite consensus disorder prediction 314 495 - -
Pste4g02169 495 Pfam IQ calmodulin-binding motif 113 132 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02169 Pste-Chr4 15769803 15772664 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02169 6 463 IQD Protein Family AT5G03040 42.708 5.29e-95 294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02169 4 15769803 15772664 Pste4g02169 4 15769803 15772664 ECH