Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02168 GCAGCCAATGTAATCATTCATGGCCTTAGAATTCATCATTGTCATCCTCAAGTTCCAGGAATGGTAATGTGTCGTCATGGAAAGGTGATTTCTTTAGGTCAAGTTGATGGAGATGCAATAAGATTGTTACGACTTCAAAGATTTAAGTTGATCACAATACATTTTATGATGGTCAAGGTGGTCTTGTTGATGTCACAGTTTAGGAATCAAAACAAGGTTATCCTTCTCGAACATAACTATGGGTATGTGCAAAATAAGAACATGAAGATAACTGTTTTATATAATTATCTTGGACTTAATTGTCATCAATACATACCAAGAATTTTCCATGGGTATGCACATTATGTCATTGGTGGAAGTATGGAACCTAGTCTTAAAAGTGAATCAATCCTCTTCATAGCACCAACGTGA 411 0.3552 AANVIIHGLRIHHCHPQVPGMVMCRHGKVISLGQVDGDAIRLLRLQRFKLITIHFMMVKVVLLMSQFRNQNKVILLEHNYGYVQNKNMKITVLYNYLGLNCHQYIPRIFHGYAHYVIGGSMEPSLKSESILFIAPT 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02168 136 PANTHER PECTATE LYASE 18-RELATED 2 135 IPR045032 GO:0030570
Pste4g02168 136 Gene3D - 1 117 IPR012334 -
Pste4g02168 136 SUPERFAMILY Pectin lyase-like 2 134 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02168 Pste-Chr4 15769771 15770344 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02168 1 135 Polysaccharide Lyase AT5G09280 43.038 1.77e-40 135