Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02151 ATGCAAGGAGAACATTTGCGTAAAGGGACTTGGCTTCAAGAGGAAGATGAACAATTGACTAGCTTCGTGGTTCGTCTTGGAGAACGAAGGTGGGATTCCCTTGCCAAAGTAGCTGGCCTGAGGAGAAGTGGTAAAAGTTGTAGGTTAAGATGGATGAACTATCTTCGTCCAAATCTCAAGCATGGTCCTTTTAGTGTTGAAGAAGAGTTACTTATTTTTCAGCTTCAGCAGCAACTGGGTAACAAGTGGGCAAAGATTGCTCGGAAACTACCTGGAAGAACTGACAATGAAATCAAGAATTACTGGAGAACTCATTTAAGAAAAAGACCTCAAGTTCAACAAGGTGCAATGCATTTGCAATTATCTATAGACATGTTTACTATAGAACATTTGATTCATGTAGTCCTAAAACACGGAGATTGCAAGTATAAATTAGAAATAGCAACACGAAACTTCAATCAGAAAAGTACTGATATGGTTTTCAAGGATCACAGCACAGGAAATGTTTGTTGTGAAGATAGTGAGTGGGAGACAAAGGATGGTAGCTCCATAGACACTTTATCCTTATCTGATTGGGAATTGGAAAACTCACCATACGAAACCAGGATATTGGATTGGATAGTAGAATTGCAAAATGGATATTGTGAGAAAGAACTAGAACAAGATTGTCATAGCACAGGAAACTGCAACTATAATCCTCAAGAATTTGAAGAGGGATGTGACTCATGGGATTATTTTACTTCCTTATGGGATATGAACTGA 762 0.3858 MQGEHLRKGTWLQEEDEQLTSFVVRLGERRWDSLAKVAGLRRSGKSCRLRWMNYLRPNLKHGPFSVEEELLIFQLQQQLGNKWAKIARKLPGRTDNEIKNYWRTHLRKRPQVQQGAMHLQLSIDMFTIEHLIHVVLKHGDCKYKLEIATRNFNQKSTDMVFKDHSTGNVCCEDSEWETKDGSSIDTLSLSDWELENSPYETRILDWIVELQNGYCEKELEQDCHSTGNCNYNPQEFEEGCDSWDYFTSLWDMN 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02151 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Pste4g02151 253 FunFam Myb transcription factor 8 60 - -
Pste4g02151 253 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Pste4g02151 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Pste4g02151 253 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 4 116 - -
Pste4g02151 253 Gene3D - 1 61 - -
Pste4g02151 253 SMART sant 60 108 IPR001005 -
Pste4g02151 253 SMART sant 7 57 IPR001005 -
Pste4g02151 253 Gene3D - 63 121 - -
Pste4g02151 253 SUPERFAMILY Homeodomain-like 6 102 IPR009057 -
Pste4g02151 253 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Pste4g02151 253 Pfam Myb-like DNA-binding domain 62 106 IPR001005 -
Pste4g02151 253 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Pste4g02151 253 CDD SANT 10 55 IPR001005 -
Pste4g02151 253 CDD SANT 81 106 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02151 Pste-Chr4 15679507 15680923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02151 4 117 MYB Transcription Factor Family AT5G59780 59.649 1.07e-44 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste4g02151 Myb_DNA-binding 2.1e-12 CL0123