Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02142 GACACACCCCTCTTTCCCCATGGACCTGCACCAAGTTGAGGTTCCACCACCTCAGTCATTTTTCAACTCTCTTAAGTACTCTCTCAAAGAGACTTTCTTCCCCGATGACCCTCTCAGACAGTTTAAGAACAAGCCACCCTCCAAGAAGTTCATGCTTGCTCTTCAGTATTTCTTCCCCATTTTCCAATGGGCACCCAAATACACCTTTCACTTCTTCAAATCTGACCTCATAGCTGGCATCACCATCGCCAGCTTGGCCATTCCTCAAGGCATCAGCTATGCCAAGCTCGCCAACCTCCCTCCAATTCTTGGACTATATTCGAGCTTCATACCACCGTTGATTTATGCGATGATGGGTAGCTCGAGGGATTTGGCGGTGGGGACTGTGGCGGTTGGATCGCTTCTGATGGGTTCCATGTTGAGCAGTGAGGTTAATCCCAATGAAGACCCAAACCTTTACCTTCACCTTGCTTTCACTGCTACATTATTTGCTGGGGTTTTTCAGGCTGCCCTGGGTCTGTTTAGGTTGGGGTTAATCGTGGATTTTCTGTCACATGCAACCATAGTAGGGTTCATGGGAGGAGCAGCCACGGTTGTGTGTCTGCAGCAACTAAAATCGATTCTTGGCCTTGTGCATTTCACCCATGGGGCTGATATCATATCAGTGATGCGTTCTGTTTTCTCCCAAACTCATGAGTGGAGGTGGGAAAGCGCTGTGTTAGGATTTGTCTTCATTTTCTTTCTCCTTATCACAAGATACTTCAGCAAAAAACGACCAAGGTATTTTTGGGTGTCAGCAATGGCACCATTGACATCGGTTATATTGGGAAGTTTGTTTGTATATTTCACTCACGCCGAGAAGCATGGAGTCGAAGTGATTGGAGAATTGAAGAAAGGTTTAAATCCGCCATCACTCACAAATCTGGTATTTGTGTCACCTTACATGAGCACAGCTGTCAAAACTGGCATGGTCGTTGGCATTATATCTCTTGCGGAAGGGATAGCAGTGGGAAGAAGCTTTGCAATGTATAAAAATTACAATATTGATGGCAACAAAGAAATGATAGCTATTGGGACCATGAATATAGTTGGTTCTTTCACCTCTTGCTACCTTACAACAGGGCCATTTTCGCGCTCAGCCGTGAATTATAATGCTGGATGCAAGACAGCAGCATCCAACATTATAATGTCAATTGCAGTAATGTTGACATTGTTATTCCTAACACCGTTGTTCCATTACACTCCCCTGGTGGTGCTATCAGCCATTATTGTATCTGCAATGCTTGGCCTCATAGATTATGAAGCAGCCATCCATCTATTTAAGATTGACAAATTTGACTTTGTCGTGTGCATGAGTGCATACTTTGGCGTGGTATTTGGCAGTGTTGAAATTGGCTTAGTCATAGCTATTGCAATATCTGTACTTCGGGTACTTCTATTTATTGCAAGGCCAAGGACATTTGTTTTGGGCAACATTCCAAATTCTATGATATACAGAAATGTTGAGCATTATCCAAATGCAAAGCGTGTTCCAGGAATTCTAATTCTGGAGATTGATGCACCAATTTACTTTGCCAATGCAAGCTATTTAAGAGAAAGGATCACAAGGTGGATTGATGAAGAGGAAGATAGACTCAAAGCTACTGGGGAGACAAGTTTGCAGTATGTTATAATATATATGAGTGCTGTTGGAAACATTGATACTAGTGGAATAAGTATGCTAGAAGAGGTCAAGAAGATTACGGAGAGAAGAGAGTTACAACTTGTTTTGGTTAATCCTGTAAGCGAGGTGATGAAGAAACTGAACAAATCGAAGTTCCAAAATCATTTAGGGGAGAAGTGGATATATCTGACTGTTGAGGAGGCCGTTGTGGCATGCAATTTCAATCTCCGTGCAAGTAAAATGAATCCCAAGAAAGAAGAATCAGAGGGTTGGAACAGTGTTTGATAGTGAGAGTGAGCCATTTACCAAGGAATTTTTAAAGAGCTCACATATGTTGTTTTCGTCTCAGTTATTTTACCACTACAATGTGTGGCGGGAGAGTTTCTGAATCATGCCGCACAAGTTTTAGAAAGAAGCATAGGAAAATGAAAGATGCACATGTCTTCTAATTTGTCGACTTTGAATCTCCTAAGTAGGGTATTCAATAATCTCTGTGTATCATGCTTGATAAAATATATTCAAATGTAAATTAATTTCCATGAGAATTGAAAAATCCTTTGGAAATGTCTTAGAACTAGAACCAATCAATGTGGATTCCCCATCATGAGTTCCCAAGCTTAAATCAATACTGGAAAAAAAAAATAATTGACAAATATAATTACCGGCAAATGTTTTCCCTTATTAATA 2350 0.4119 MDLHQVEVPPPQSFFNSLKYSLKETFFPDDPLRQFKNKPPSKKFMLALQYFFPIFQWAPKYTFHFFKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMGSMLSSEVNPNEDPNLYLHLAFTATLFAGVFQAALGLFRLGLIVDFLSHATIVGFMGGAATVVCLQQLKSILGLVHFTHGADIISVMRSVFSQTHEWRWESAVLGFVFIFFLLITRYFSKKRPRYFWVSAMAPLTSVILGSLFVYFTHAEKHGVEVIGELKKGLNPPSLTNLVFVSPYMSTAVKTGMVVGIISLAEGIAVGRSFAMYKNYNIDGNKEMIAIGTMNIVGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIIMSIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYEAAIHLFKIDKFDFVVCMSAYFGVVFGSVEIGLVIAIAISVLRVLLFIARPRTFVLGNIPNSMIYRNVEHYPNAKRVPGILILEIDAPIYFANASYLRERITRWIDEEEDRLKATGETSLQYVIIYMSAVGNIDTSGISMLEEVKKITERRELQLVLVNPVSEVMKKLNKSKFQNHLGEKWIYLTVEEAVVACNFNLRASKMNPKKEESEGWNSV 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02142 642 FunFam Sulfate transporter 31 477 623 - -
Pste4g02142 642 SUPERFAMILY SpoIIaa-like 500 620 IPR036513 -
Pste4g02142 642 Gene3D STAS domain 477 623 IPR036513 -
Pste4g02142 642 PANTHER SULFATE TRANSPORTER 12 623 IPR001902 GO:0016020|GO:0055085
Pste4g02142 642 ProSiteProfiles STAS domain profile. 497 620 IPR002645 -
Pste4g02142 642 Pfam STAS domain 498 616 IPR002645 -
Pste4g02142 642 ProSitePatterns SLC26A transporters signature. 95 116 IPR018045 GO:0008271|GO:0008272
Pste4g02142 642 Pfam Sulfate permease family 66 446 IPR011547 GO:0016020
Pste4g02142 642 CDD STAS_SulP_like_sulfate_transporter 498 613 - -
Pste4g02142 642 NCBIfam sulfate permease 53 616 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02142 Pste-Chr4 15635163 15642045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02142 4 628 Inorganic Solute Cotransporters AT4G02700 68.051 0.0 884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02142 4 15635163 15642045 Pste4g02142 4 15635163 15642045 ECH
Pste5g00982 5 6422295 6430722 Pste4g02142 4 15635163 15642045 PCT