LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste4g02131	CTTCCCTCTCTCTCTCTCTCTCTCTTTGTTGTTTTCCACCCTCCTCTCTCTCTCTTTCTCTTTTCCTCTAAATCTAATTTTGGACCAGTAGACTTGCTTCATATCCCTGGCATTGAACTCTAGATCTTTTCTATCACTGTGTTGGGATTTGTGTTTCAGTGTTTGGACTCTGACTCTTTGTAATGCTTTCATTGGTTCTCCCATTATTCTCTGCTTTCTTTTCTATGGTTTAGAAGTAAGCATCAGAAAAGGGTAGGCCACCCAGAAATATTTTAGTACTTTTTCTGGGTCTTTGCTTTGAGTTTGGCAGAATCAAGAATTTAAGATGGGTTATTCTTATCTGGTTTTGCTTTTTTCCATTTGTGGGGTGGTTTCCTTAGCTTCCCCCATTGAAGATCAGCAGAGAGATAGAATTACTCAGCTGCCAGGGCAACCAAAGAATGTGGGATTTGGTCAGTATTCTGGCTATGTGACTGTGAATGAACAGAGTGGGAGAGCACTGTTTTACTGGCTGGTTGAGGCACCAGTGAAGCGTGGACCAAGGTCAAGGCCACTAGTGTTGTGGCTCAATGGTGGCCCTGGATGTTCCTCAATTGCATATGGTGCATCTGAGGAAATTGGTCCTTTTCGCATTAGGCCTGATGGCAAGTCACTTTACTTGAACCGTTATGCTTGGAACAATTTGGCAAATGTACTGTTCCTTGATTCTCCTGCTGGTGTTGGTTTTTCATATGCAAATAAGACAACGGATCTGTATACATTTGGTGACAAGAGAACAGCTGAAGATGCGTATACTTTTCTTGTTAATTGGTTTGAAAGATTTCCTCAGTATAAGCATAGAGACTTCTACATTGCTGGAGAAAGTTATGCAGGTCACTATGTTCCTCAGTTGGCTCAAATTGTTTACGAGAAAAATAAGGGAATCAAGAATCCAGGAATAAATTTTAAGGGATTTATGGTTGGCAATGCTGTTACTGATGATTATCACGATTACGTTGGCACATTTGAATATTGGTGGACCCATGGTTTGGTTTCAGATTCCACATATAGGATGCTAAAAATTGCCTGCGATTTTGGGTCCTCTCAGCATCCATCAGTACAATGCATGCAGGCTCTCAGAGTTGCAAGTGTGGAGCAGGGAAACATCGACCCATATAGCGTTTATACACAGCCTTGTAACAATACAGCATCACTCAGACGCGGCTTGAAGGGGCGCTATCCATGGATGTCTCGAGCATATGATCCATGTACTGAAAGGTATTCTGATTTGTATTTCAACCGTCCAGAGGTTCAGAAGGCATTTCATGCCAATGTTACTGGAATTCCTTATGCATGGAAAGCATGCAGTGATATTGTTGGGAACTATTGGACTGATTCTCCATTATCTATGCTTCCTATATATCAAGAACTTATTATTGCTGGTCTCCGAATATGGGTATACAGTGGAGACACTGATGCAGTGGTTCCAGTGACTGCTACTCGATATTCAATAGATGCCTTGAAGCTACCTACCATCATCAATTGGTACCCTTGGTATGATAATGGCAAGGTTGGTGGTTGGAGTCAAGTTTATAAAGGGTTGACATTGGTTACAGTAAGAGGAGCTGGACATGAGGTTCCTCTCCATAGGCCTCGCCAGGCATTCATTCTTTTTAGGTCATTCTTGGAGAACAAGTCCATGCCATCGCAAAGTTAGACATTTGTTCTTTTACACCTGATGAATATTCACACAAGTATATATAGGAGTACCATATATAAAAGTACCACCATTCTTGCATCTAGCTAGGCTAAGAATAATTGTCATTCATATACATATGGGACATACCCAGACAGAATAAGGAATTCACTCCTCATGAGTTCACTCTTGGTTATTCTCTGCCTCAAAATTTGATTATTAAATTTACCAACAGTAGTTCTTCTACTTCTATTTGTTACTGAAAATATGATTATTTGTATGAAATGATATTCTTTATATGATTTCCATC	1985	0.404	MGYSYLVLLFSICGVVSLASPIEDQQRDRITQLPGQPKNVGFGQYSGYVTVNEQSGRALFYWLVEAPVKRGPRSRPLVLWLNGGPGCSSIAYGASEEIGPFRIRPDGKSLYLNRYAWNNLANVLFLDSPAGVGFSYANKTTDLYTFGDKRTAEDAYTFLVNWFERFPQYKHRDFYIAGESYAGHYVPQLAQIVYEKNKGIKNPGINFKGFMVGNAVTDDYHDYVGTFEYWWTHGLVSDSTYRMLKIACDFGSSQHPSVQCMQALRVASVEQGNIDPYSVYTQPCNNTASLRRGLKGRYPWMSRAYDPCTERYSDLYFNRPEVQKAFHANVTGIPYAWKACSDIVGNYWTDSPLSMLPIYQELIIAGLRIWVYSGDTDAVVPVTATRYSIDALKLPTIINWYPWYDNGKVGGWSQVYKGLTLVTVRGAGHEVPLHRPRQAFILFRSFLENKSMPSQS	456

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste4g02131	456	Gene3D	alpha/beta hydrolase	24	286	IPR029058	-
	Pste4g02131	456	ProSitePatterns	Serine carboxypeptidases, histidine active site.	419	436	IPR033124	GO:0004185
	Pste4g02131	456	FunFam	Carboxypeptidase	355	449	-	-
	Pste4g02131	456	SUPERFAMILY	alpha/beta-Hydrolases	25	452	IPR029058	-
	Pste4g02131	456	ProSitePatterns	Serine carboxypeptidases, serine active site.	176	183	IPR018202	GO:0004185
	Pste4g02131	456	Pfam	Serine carboxypeptidase	34	449	IPR001563	GO:0004185\|GO:0006508
	Pste4g02131	456	PRINTS	Carboxypeptidase C serine protease (S10) family signature	419	432	IPR001563	GO:0004185\|GO:0006508
	Pste4g02131	456	PRINTS	Carboxypeptidase C serine protease (S10) family signature	113	125	IPR001563	GO:0004185\|GO:0006508
	Pste4g02131	456	PRINTS	Carboxypeptidase C serine protease (S10) family signature	126	136	IPR001563	GO:0004185\|GO:0006508
	Pste4g02131	456	PRINTS	Carboxypeptidase C serine protease (S10) family signature	162	187	IPR001563	GO:0004185\|GO:0006508
	Pste4g02131	456	Gene3D	-	308	344	-	-
	Pste4g02131	456	Gene3D	-	355	448	-	-
	Pste4g02131	456	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	30	436	IPR001563	GO:0004185\|GO:0006508
	Pste4g02131	456	FunFam	Carboxypeptidase	24	286	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste4g02131	Pste-Chr4	15584495	15590057	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste4g02131	337	452	Calmodulin-binding Proteins	AT2G22960	30.769	2.69e-14	69.3

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste4g02131	4	15584495	15590057	Pste4g02131	4	15584495	15590057	ECH