Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02127 AGGAAGCTTATAGTGCTATTATAGTGGAGATCTGGGACTTGTTTTGCCTCTTATGCCCCATGAGGACATTCTCCACTGCAGAATCATGTAAAGAAGCACACCATAATGCTTTAAATCCACAATCCTGGCTCCAAGTTGAAAGAGGGAAGCTTCCCAAGCTGTCATCACAGTCCTCCTCAGCATCAATAGAATCTCTAATTAAGATCCCACAGCCACCTATACTACCATTCTTCAAGCCTCTTGATTATGTGGAAGTTTTTAGGGGCCTGGGGGATGTTAAACTGATGCGTAGAAGCCTCCTATCAGCTTGGCAGAGAGCAAACACTGTTCATGAGAAGATTATATTTGGTGCATGGCTGAAGTATGGGAAACAAGGGGAAGAATTAGTTGCTCAGTTGGTCACAGCTTGTGGTAAATGTGAAAAGGAATTTGGACCCACAGATGTAGAATGTCATATTCCTTTTGATAAAGATATAAGCTCCCACGATAGAGTTTTGATGAATGGGAACAACGCTTCACAATATGTTATCTTTACAATCGGAGATGAGAAGATAGTCTGTGATAGACAAAAGATTTCTGAACTTTCAGCACCGTTTCATGCAATGCTGAAGGGGTGTTTCAGGGAATCACTTTTCGAGACTATAGATTTGTCTGAAAACAATATCTCTCCTTCAGGTATGAGGACAATAAATTATTTCAGCTTGACAGGGAGCTTACATGATGTCCCTCCAAATCTATTAGTGGAGATATTAGCTTTTGCAAACAAGTATTGTTGCGAAAAACTAAAACAGGCTTGTGGTAGAAGACTTGCATCCTTAGTTTCCTCCAATCAAGATGCACTGGAACTCATGGAATATGCTGTTGATCAGAATTCAGATGTTCTTGCGGCTTCTTGTTTACAAGTGCTTTTACGTGATATTCCCAACTGTTTGAGTGACAGTCGGGTTGTGGAGTTATTTATTCATGCTAATAAGCAGCAGTTAGCAGTTATGGTTGGGCCTGGTATATTTGCACTTTTCTGTTTCTTAAGTGAAGTTTCTATGAACCTTAATTCTAGTTCAGACACAACAGCTCATTTCCTGGAACGGTTAGTTGATTTTGCTGAAAATGATAAGCAGAGACTGCTGGCATTTCATCAATTGGGATGTGTAAGACTCTCAAGGAAAGAATATGATGAAGCCTATTGTCTTTTTGATATGGCTTTAAATGCAGGTCATATTTATTCTGTTGCGGGTTTAGCTAGACTGGACTCTATAAAGAGTGAGAAGCTTTTATCTTATGAGAAGATCAGCTCAGTCATTTCTTCTGTTAATCCACATGGATGGATGTACCAGGAAAGATCACTATACGGTGAAGGTGATTTGAGGTGGAAGGACCTTGAGAAAGCAACTGAACGGGACCCTACTCTTGTATATCCCTACATGTATAGAACTGCCTCTTTAATGAGGGCAGGGAATGTTCAAGGTGCTCTTGCTGAAATAAACCGGATTATTGGCTTCAGACTTTCATTAGAGTGCTTGGAACTACGGTTTTTTATATATCTGGCTCTTGAGGACTACAAAGCAGCGCTCCGTGATGTTCAAGCAATTCTTACCCTTTGTCCATCTTATAAAATGTTTGAAGGGCGTGTAGCTGCATGTCAGCTCTGTACTCTTGTGCGTGAGCATGTTGAACATTGGACAACAGCTGATTGTTGGGCACAGTTATATGACTGTTGGTCTTCTGTTGATGATATTGAGTCCCTATCTGTAATCTACCAGATGCTTGAATCTGACGCAGCAAAAGGTGTTCTATACTTCAGACAGTCATTGCTTCTCCTTAGGCTAAACTGTCCTGAAGCAGCCATGCGAAGTTTACAGTTAGCTTGGCAACATGCACCAAGTGAGCATGAGAGACTTGTATATGAGGGGTGGATCTTGTATGACACAGGTCATTATGAGGAAGGGCTCCAAAAAGCTGAAGAGTCTATTAGTATTAAAAGGTCTTTTGAGGCCTACTTCCTAAAGGCCTATGCATTGGCTGACTCTTGTGTAGATTCATTATGTTCTTTGACTGTTATTTCACTTCTGGAAGATGCCTTGAGGTGTCCTTCTGATAACCTGCGCAAAGGTCAGGCATTAAACAATCTTGGGAGTGTCTATGTTGATTGTGGGAAATTGGACTTAGCGGAAGATTGCTATATCAAGGCCCTCAAAATCCAGCACACCCGAGCCCATCAGGGTCTTGCTCGTGTTCATTTTCTAAAAAATGATAAGGTTGCTGCTTACAAGGAAATGACCTATCTTATTGAGAAGGCAAGAAACAATGCATCAGCGTATGAGAAGAGGTCTGAGTATGGTGATCGTGAACTCACAAAAGCAGATTTAGAGATGGTGACTAGATTGGATCCACTCAGGGTGTATCCTTATAGATATCGAGCAGCAGTTTTGATGGACAACCATAAGGAAGAGGAAGCCATTGCAGAACTGTCCAGAGCAATTGCATTCAAAGCTGATTTGCACCTCTTACATCTACGTGCAGCATTCCATGAACACAAGGGAGATGTCTTTGGTGCGCTAAGAGACTGTCGTGCTGCACTCTCAGTGGATCCAAACCACCAAAAGATGTTGGAACTTCATTGCCGGGTTAATAGTCACGAGCTATGAGTCAAGAACGTTACTTATGCAAAATGAGAACACAATATAATATTGGCTGGCAGAAAACGCCAAGCCCTGAAAAGTAAAAAAGCCATATTATTCAGATTGAAGAAGGACCAGCATTTATGCCGCCATCAACGGTCACGAAAATTAAACTTGTAAATGAGAAGTATAGTTAAATTTGTAAACTCTATTATTAGAAGTGGCCGAAATTTGCTCATTACTGCTTTACAATGTTTTGCTACTAAAATTAGGGATTCAGAATTCAAATACAAC 2912 0.4087 MRTFSTAESCKEAHHNALNPQSWLQVERGKLPKLSSQSSSASIESLIKIPQPPILPFFKPLDYVEVFRGLGDVKLMRRSLLSAWQRANTVHEKIIFGAWLKYGKQGEELVAQLVTACGKCEKEFGPTDVECHIPFDKDISSHDRVLMNGNNASQYVIFTIGDEKIVCDRQKISELSAPFHAMLKGCFRESLFETIDLSENNISPSGMRTINYFSLTGSLHDVPPNLLVEILAFANKYCCEKLKQACGRRLASLVSSNQDALELMEYAVDQNSDVLAASCLQVLLRDIPNCLSDSRVVELFIHANKQQLAVMVGPGIFALFCFLSEVSMNLNSSSDTTAHFLERLVDFAENDKQRLLAFHQLGCVRLSRKEYDEAYCLFDMALNAGHIYSVAGLARLDSIKSEKLLSYEKISSVISSVNPHGWMYQERSLYGEGDLRWKDLEKATERDPTLVYPYMYRTASLMRAGNVQGALAEINRIIGFRLSLECLELRFFIYLALEDYKAALRDVQAILTLCPSYKMFEGRVAACQLCTLVREHVEHWTTADCWAQLYDCWSSVDDIESLSVIYQMLESDAAKGVLYFRQSLLLLRLNCPEAAMRSLQLAWQHAPSEHERLVYEGWILYDTGHYEEGLQKAEESISIKRSFEAYFLKAYALADSCVDSLCSLTVISLLEDALRCPSDNLRKGQALNNLGSVYVDCGKLDLAEDCYIKALKIQHTRAHQGLARVHFLKNDKVAAYKEMTYLIEKARNNASAYEKRSEYGDRELTKADLEMVTRLDPLRVYPYRYRAAVLMDNHKEEEAIAELSRAIAFKADLHLLHLRAAFHEHKGDVFGALRDCRAALSVDPNHQKMLELHCRVNSHEL 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02127 861 Gene3D Tetratricopeptide repeat domain 665 860 IPR011990 GO:0005515
Pste4g02127 861 PANTHER ETO1-RELATED 1 66 IPR044631 GO:0010105
Pste4g02127 861 Gene3D Potassium Channel Kv1.1; Chain A 149 293 IPR011333 -
Pste4g02127 861 SUPERFAMILY POZ domain 156 251 IPR011333 -
Pste4g02127 861 SUPERFAMILY TPR-like 668 854 IPR011990 GO:0005515
Pste4g02127 861 SMART tpr_5 484 517 IPR019734 GO:0005515
Pste4g02127 861 SMART tpr_5 355 388 IPR019734 GO:0005515
Pste4g02127 861 SMART tpr_5 610 643 IPR019734 GO:0005515
Pste4g02127 861 SMART tpr_5 813 846 IPR019734 GO:0005515
Pste4g02127 861 SMART tpr_5 684 717 IPR019734 GO:0005515
Pste4g02127 861 SUPERFAMILY TPR-like 493 650 IPR011990 GO:0005515
Pste4g02127 861 SUPERFAMILY TPR-like 349 520 IPR011990 GO:0005515
Pste4g02127 861 SMART BTB_4 154 254 IPR000210 GO:0005515
Pste4g02127 861 Coils Coil 736 756 - -
Pste4g02127 861 Gene3D Tetratricopeptide repeat domain 539 661 IPR011990 GO:0005515
Pste4g02127 861 Gene3D Tetratricopeptide repeat domain 334 521 IPR011990 GO:0005515
Pste4g02127 861 ProSiteProfiles TPR repeat profile. 684 717 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02127 Pste-Chr4 15550861 15554741 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01004 5 6625701 6640865 Pste4g02127 4 15550861 15554741 PCT