Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02122 GACAACCAACTATTTCTAACGGCATAAACGATTTTCCTTCTCAATAAGGAAAGGGGTCATCTGTTATTTTGTCTCAAAAATAAAACTTAATTATTCACCTTTTCTTCATGTTCATTCATAATCTTTCTCTTGAATCTTGTTTTCATTTTGTCATAGATTTTCTTCTTTCTATAATCTTCATACGTTTTCTCCCTTCTTCCCTCCCCGTTGTACTTTCTTTGGTAATACTCTTAAATTTTCTTTTCCATGCTTATGGTTATGGGCAAATTTCCTTTCTAAATATATCAGGTTGGAATAAAGTTACCAATCTAATTAAAAGCATAAATAACGAAATTCACGTATCAACCACTAATACGTATCCAATCTTCGAGTAAACCAGAAAAAATTAAGAATGAATAATACGTATCCAATGAAAGAAGAGTACTTGGAATCATCACCATCATCATCATATCAATTAGGTTGTGAATATCCACCAAAGCCAATTGAGGGACTTCATGACACGGGACCCCCGCCATTTCTCACCAAAACTTTTGATGTTGTGGATGACCCAACTACCAACCATGTAGTTTCTTGGAGCAGAGAAGGCACAAGCTTTGTGGTTTGGGATCCAGATACCTTCTCTACAAGTCTCCTTCCCAGATACTTCAAGCACAACAATTTCTCAAGCTTTGTCAGGCAACTAAATACATACGGTTTTAGAAAAATTGATCCAGATAGATGGGAGTTTGCGAATGAAGGATTCATCAGAGGGCACAGGCACTTGTTGAGGAGTATAAGGAGAAAGAAGGCACCTTCCCAACTAACACAAGGTCACAACTGTGTTAAAGTTGGACGTTTTGAAATAGACAAAGAGATTGATCGTTTGAGGCATGACAAACTAGAGTTGATGATGGAGCTTGTGAATCTTAGACAGCAACAACAGAAAGCAAGAGTGTACATTCAGGAGATGGAGCAAAGGCTACAGGGGACAGAAATCAAGCAGCAACAAATGATGTCATTCTTAGCTAGAGCAATAAAAAATCCTACCTTCATACACCAGCTCCTACAAAAAGAGGAGAGAAAGGAAATTGAAGAAGCCTTCACCAAAAAGAGAAGGCAAATTGAGCAAGGAACTGGAGGCATTGGAGAAACAAGCAGTGGGGGTGAAGGAAGGAACATGTTTAAAGTTCAAGCCTTAGAATTTGGGGATAGTGAATTTGGAATGTCAGAGTTGGAAATGTTAGCTAGAGAAATTCAGGGCTTTGGAAAGGGGAGGACAGACCGGGAGGTAGGACATGAGGAACTAGAATCACAAGAGAGGCTGGATAGAGTACTTGATGAAGAGTTCTGGGAAGAACTATTTAGTGAGAAATTTGAGGGTGGAATAGACATTCAAACTGCTGAAGATAAAGATGAAGATGTTGTCAATGTGTAG 1414 0.3854 MNNTYPMKEEYLESSPSSSYQLGCEYPPKPIEGLHDTGPPPFLTKTFDVVDDPTTNHVVSWSREGTSFVVWDPDTFSTSLLPRYFKHNNFSSFVRQLNTYGFRKIDPDRWEFANEGFIRGHRHLLRSIRRKKAPSQLTQGHNCVKVGRFEIDKEIDRLRHDKLELMMELVNLRQQQQKARVYIQEMEQRLQGTEIKQQQMMSFLARAIKNPTFIHQLLQKEERKEIEEAFTKKRRQIEQGTGGIGETSSGGEGRNMFKVQALEFGDSEFGMSELEMLAREIQGFGKGRTDREVGHEELESQERLDRVLDEEFWEELFSEKFEGGIDIQTAEDKDEDVVNV 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02122 340 FunFam Heat shock transcription factor 1 35 132 - -
Pste4g02122 340 SMART hsfneu3 38 131 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste4g02122 340 Gene3D - 34 132 IPR036388 -
Pste4g02122 340 MobiDBLite consensus disorder prediction 1 20 - -
Pste4g02122 340 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 28 240 IPR027725 -
Pste4g02122 340 PRINTS Heat shock factor (HSF) domain signature 80 92 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste4g02122 340 PRINTS Heat shock factor (HSF) domain signature 42 65 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste4g02122 340 PRINTS Heat shock factor (HSF) domain signature 93 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste4g02122 340 Coils Coil 155 189 - -
Pste4g02122 340 SUPERFAMILY "Winged helix" DNA-binding domain 38 131 IPR036390 -
Pste4g02122 340 Pfam HSF-type DNA-binding 42 131 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste4g02122 340 ProSitePatterns HSF-type DNA-binding domain signature. 81 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02122 Pste-Chr4 15506017 15507801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02122 28 323 HSF AT3G22830 51.335 8.77e-109 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pste4g02122 HSF_DNA-bind 2.9e-32 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02122 4 15506017 15507801 Pste4g02122 4 15506017 15507801 ECH
Pste5g01008 5 6665446 6667227 Pste4g02122 4 15506017 15507801 PCT