Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02120 CCACAAGGGGTGACATCGCACCCAGCTGCCAAGGATTGTCCACATAATCAGATCAGAGGATGACACGTCGCGCAACATGATCCGCTGATGCAGCCCCATAATCCAACGCCTGTCATTATTTTTCCACCAACCCTCCCTTGTGCATCGTTGCCACCCTTTATGCCCACCTACCAAACACCAACGCTCCAGATTCCAAAGCCCCCCCATTTCACATTATATAACCACCCCTCTCTCTGTCCCTCTTCCCTCAGGAAATCACCCACAACACAACACACCGATTTCCCATTTCCCAATCATTCCTTAATTTAAAACCTCCACCTACCCACCCAAACACGCCGCTAACATGGCTTCTAATGCCAACGCCAACGCCAACGGCAACACGCACGACGCTACCTTTTGCCTCACCAATGGGAACAGTAAGTATGTCAGTGATCCCTTGAACTGGGGCGCCGCGGCTGAGGCCATGAAGGGGAGCCACCTCCACGAGGTCAAACGCATGGTGGAGGAGTACCGGAGGCCGCTCGTCAATCTCGGCGGAGAAACGCTCACCATTTCCCAGGTCGCGGCTATTGCTGCCCACGACCAAGGCGTCAAGGTCCAGCTCGCCGAATCCTCCCGCGCCGCCGTCAAGGCCAGCAGTGACTGGGTTATGGAGAGCATGAACAAGGGCACCGACAGTTACGGTGTCACCACCGGCTTCGGCGCCACCTCTCACCGCCGAACCAAACAGGGTGGTGCCTTGCAGAAGGAGCTAATCAGGTTTTTGAATGCTGGAATATTTGGCAACGGTACAGAGTCCAATTGCACCCTACCCCACACAGCAACCAGAGCAGCTATGCTGGTGAGAATCAACACTCTTCTTCAAGGGTACTCAGGCATTAGGTTTGAGATTTTGGAGGCCATCACAAAGCTTCTGAACAACAACATCACCCCATGCCTGCCACTTAGGGGTACAATTACAGCTTCTGGTGATCTTGTTCCTTTGTCTTACATCGCCGGTTTGCTAACTGGAAGACCAAACTCCAAGGCTGTTGGACCCTCTGGGGAGATTCTGAATGCCAAGGAAGCCTTTGAATTGGCCAACATTGGCTCTGACTTCTTTGAGTTGCAACCCAAGGAAGGCCTTGCTCTTGTGAATGGTACTGCTGTTGGTTCTGGCTTGGCTTCTATTGTTCTCTTTGAGGCAAACATCCTTGCTGTCTTGTCTGAGGTTATTTCAGCAATTTTTGCTGAAGTTATGCAAGGGAAGCCTGAGTTCACTGACCATTTGACTCACAAGCTAAAACACCACCCTGGACAGATTGAAGCCGCTGCTATTATGGAACACATTTTGGATGGAAGCTCTTACATCAAAGCAGCCAAGAAGTTGCATGAGATTGATCCTTTGCAGAAACCTAAACAAGACCGTTATGCTCTTAGAACTTCACCCCAATGGCTTGGTCCTCAAATTGAAGTCATCAGATTTTCTACCAAGTCAATTGAGAGGGAGATCAACTCAGTTAATGACAACCCTTTGATTGATGTGTCTAGGAACAAGGCCCTTCATGGTGGTAACTTCCAAGGAACCCCCATTGGAGTGTCCATGGATAACACCCGTTTGGCTCTTGCATCAATTGGCAAACTCATGTTTGCTCAATTCTCTGAGCTTGTAAACGACTATTACAACAATGGATTGCCTTCAAATCTCACCGCCAGCAGAAACCCCAGCTTGGATTATGGTTTCAAGGGAGCTGAAATCGCCATGGCATCTTACTGCTCTGAACTCCAATATTTGGCTAACCCAGTAACCAGCCATGTCCAAAGTGCCGAGCAACATAACCAGGATGTGAACTCTTTGGGGTTGATTTCATCTAGAAAAACAAACGAGGCTATTGAGATCCTCAAGCTCATGTCTTCCACTTTCCTCATTGCACTTTGCCAGGCCATTGACTTGAGGCACTTGGAGGAGAATTTGAAGAACACAGTGAAGAATGTCGTGAGCCAAGTTGCCAAGAGGACTCTCACCACAGGTGTCAACGGAGAACTTCACCCTTCAAGATTTTGTGAGAAAGACTTACTGAAAGTGGTGGATAGGGAGTACACATTTGCGTACGTTGATGACCCCTGCAGTGGCACATACCCTTTGATGCAAAAACTAAGGCAAGTGCTTGTGGAGTATGCATTGGCCAATGGGGAGAACGAGAAAAACACCAACACATCAATCTTCCAAAAGATAGCAGCATTTGAGGAGGAGTTGAAGGCCCTCTTGCCCAAGGAAGTGGAAGGTGCAAGACTTGCATATGAGAATGACCAATGTGCAATTCCCAACAAGATTAAGGAATGTAGGTCATACCCCTTGTACAAGTTTGTGAGAGAGGAGTTGGGGACAACATTGCTAACTGGTGAAAAGGTTACCTCACCAGGGGAAGAGTGTGACAAACTGTTCACTGCCATGTGTCAAGGAAAAATTATCGATCCTCTTATGGAATGCCTTGGTGAGTGGAATGGTGCCCCTCTTCCAATTTGTTAGTTCATTAAGCGTTTCCTTCAAGACTGGTTTCTAATTTCTATATACGTATTTGTGTTCATATAAGCATTTGGTTTGTCTATAAGCTATGGCAAATCAACCCACATACAACCCTCAGTTTTCCTTGCTGTCAAGGAACTTGTAATTCATATTGTAATAGAATTCCATTTGTTTGCCGTAGCTTTCAGCCTTTGAGTGCAAATATTAATACATGAAGGATGTTTTCTCATGAATAATTAGTATTTTCGCTTCTTTTATGCTAGATTTTACTGTATGATCTCTACCG 2792 0.471 MASNANANANGNTHDATFCLTNGNSKYVSDPLNWGAAAEAMKGSHLHEVKRMVEEYRRPLVNLGGETLTISQVAAIAAHDQGVKVQLAESSRAAVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESNCTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGEILNAKEAFELANIGSDFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEVISAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYIKAAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDYYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLIALCQAIDLRHLEENLKNTVKNVVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYTFAYVDDPCSGTYPLMQKLRQVLVEYALANGENEKNTNTSIFQKIAAFEEELKALLPKEVEGARLAYENDQCAIPNKIKECRSYPLYKFVREELGTTLLTGEKVTSPGEECDKLFTAMCQGKIIDPLMECLGEWNGAPLPIC 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02120 721 FunFam Phenylalanine ammonia-lyase 534 655 - -
Pste4g02120 721 FunFam Phenylalanine ammonia-lyase 21 267 - -
Pste4g02120 721 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 203 219 IPR022313 GO:0016841
Pste4g02120 721 Gene3D - 21 267 IPR024083 -
Pste4g02120 721 PANTHER HISTIDINE AMMONIA-LYASE 23 721 IPR001106 -
Pste4g02120 721 Gene3D Fumarase/aspartase (Central domain) 268 716 - -
Pste4g02120 721 NCBIfam phenylalanine ammonia-lyase 30 710 IPR005922 GO:0005737|GO:0006559|GO:0016841
Pste4g02120 721 Gene3D - 534 655 IPR023144 -
Pste4g02120 721 Pfam Aromatic amino acid lyase 68 548 IPR001106 -
Pste4g02120 721 FunFam Phenylalanine ammonia-lyase 268 575 - -
Pste4g02120 721 CDD PAL-HAL 66 531 IPR001106 -
Pste4g02120 721 SUPERFAMILY L-aspartase-like 30 721 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02120 Pste-Chr4 15499649 15504452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02120 1 721 Monolignol Biosynthesis Gene Families AT2G37040 81.655 0.0 1248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02120 4 15499649 15504452 Pste5g01931 5 12246834 12250422 ECH
Pste4g02120 4 15499649 15504452 Pste4g02120 4 15499649 15504452 ECH