Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02119 GGAGGTTAAAAAATGGGTGGAAGTGGAGGGAGAGGAGGTGGGAATGGGTGATGAGGAGATAGATGTATAGAATAATATCGAGACCGGCGTCGAAGTTCCGGCAGTTGAGGTCAGGAGCGAAGATATCAGCGAGAGATAGCGAGGAGGAGCACGCGTTCCAGATCCTATGGCGTTACCAGATCCTGGACCCGGACAGCGACATTGTGGCATATTGGAACAGGGTGTTCCTGGTTACGAGCCTCCTGGCACTCTTCGTGGACCCTCTTTACTTCTTCCTCCCCACCGTTGGTGGCCCCGCATGCCTCCAGGCTGACCCGAAACTCAGCATCCTCGTCACCATCATTCGCTCCTTCGCCGACCTCTTCTACGTCCTCCACATGCTCATGAAGTTCCGCACCGCCTTCGTCGCCCCCAACTCTAGAATCTTCGGCCGCGGTGACCTCGTCATGGACGCCCGCCCCATCGCCCTTCGTTACTTGAAGTCTGATTTCGTCATCGACCTCGCCGCCACCATCCCTCTCCCCCAGATTGTCATCTGGCTCGTCATTCCCGCCAGTCGCAACGCTCGCACTGACCACGCCAACAACACTCTCGCCCTTTTCGTTCTTATTCAATACATTCCTCGCTTGTTTCTCATCTTTCATTTGAACCGCCGTATTCAGAAGACCACTGGTGTCATCGCCAAGACTCCTTGGATTGGTGCCGCTTACAATCTTGTTCTCTACATCCTCGCCAGCCACGTCACTGGAGCCACTTGGTATCTTTCTTCCATTGGCAGGCAATTTAACTGTTGGAAAGCCCAGTGCGAATTTGAGAACAAATCACATGCCCTCTCTTGCTTTTCTAGTTACCTCGATTGTAATAGTCTCCACCTCCCTGATCGCCAATACTGGCTCAACATCACCCGTGTTATTTCCAAATGTGATGCCAAGTCCAAAGTCAACATCAAATATAAATTCGGCATGTTCGCTGATGCTTTCCTCAATGATGTTGTCACCTCTTCTTTCAAGGAAAGATATTTCTATTGTCTTTGGTGGGGTTTAAGAAACTTAAGTTCATACGGACAAAATTTGGACACCACCACTTATCTTCCAGAGACATTGTTTTGCATCTTCTTATGCATTGTTGGACTTGTTCTCTTTTCACTTTTGATTGGAAACATGCAGACATACTTGAGTTCGATGACCGTGAGACTTGAAGAATGGAGGATTCGAAAAAGGGATACCGAGGAGTGGATGAGGCATCGGCAGTTACCACCTGATCTACAGGCACGCGTTCGTCGTTTTGTTCAGTATAAATGGCTTGCAACCAGAGGAGTTAACGAAGAATCCATACTACTTTCATTACCTTTGGATCTTCGTCGAGAAATTCAACACCACTTATGTCTGTCTCTTGTGCGCCGGGTCCCCTTCTTCTCACAAATGGATGATCAACTTCTTGATGCAATTTGTGAACGGCTAGTGTCATCACTAAGCACGGAGGGCACATATATATTTCGAGAGGGTGATCCAGTGGATGAAATGTTGTTTATCATTAGAGGGCAATTAGAGAGCTCCACAACAAATGGAGGAAGATCAGGATTCTTCAACTCCATCACGCTTCGTCCAGGTGACTTTTGCGGGGAGGAATTACTGACATGGGCCTTAATGCCAAACTCAACCCTCAACCTACCTTCTTCAACTCGTACTGTCAAAGCTCTTTCCGAAGTAGAAGCATTTGCACTGCAGGCCGAGGATCTGAAATTTGTGGCAGGTCAGTTTAAGAGGCTTCACAGCAAGAAACTTCAGCATGCATTTAGGTATTATTCTCATCAATGGAGGACATGGGCTTCTTGCTTCATACAAGCTGCTTGGAGACGGCTTCAGAAGAGAAAGGCAACAAGGGAGTTATCCCTCAAAGAGGGTGTCTACTACATGGCATTGCCCGAGACTGAAGAAAGTGCAAATTATGAATTCTCAGGGAATGACAAGAAGGTTCAGAATCTTGGTGCAACCGTTTTGGCCTCAAGGTTTGCTGCCAATACAAGGAAAGTCAACCATAAGCTACAAGATCCAGTCCCTCAATTGTTCAAGCCAGATGAACCTGATTTTTCTATAGACCATGAAGTTTAGTCACTATATCAACCAAAAATCTGTTTATTAACATTGGTTCAATATATAGCCAGTTTTATGACTTGGATGTAAATG 2186 0.4689 MYRIISRPASKFRQLRSGAKISARDSEEEHAFQILWRYQILDPDSDIVAYWNRVFLVTSLLALFVDPLYFFLPTVGGPACLQADPKLSILVTIIRSFADLFYVLHMLMKFRTAFVAPNSRIFGRGDLVMDARPIALRYLKSDFVIDLAATIPLPQIVIWLVIPASRNARTDHANNTLALFVLIQYIPRLFLIFHLNRRIQKTTGVIAKTPWIGAAYNLVLYILASHVTGATWYLSSIGRQFNCWKAQCEFENKSHALSCFSSYLDCNSLHLPDRQYWLNITRVISKCDAKSKVNIKYKFGMFADAFLNDVVTSSFKERYFYCLWWGLRNLSSYGQNLDTTTYLPETLFCIFLCIVGLVLFSLLIGNMQTYLSSMTVRLEEWRIRKRDTEEWMRHRQLPPDLQARVRRFVQYKWLATRGVNEESILLSLPLDLRREIQHHLCLSLVRRVPFFSQMDDQLLDAICERLVSSLSTEGTYIFREGDPVDEMLFIIRGQLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALMPNSTLNLPSSTRTVKALSEVEAFALQAEDLKFVAGQFKRLHSKKLQHAFRYYSHQWRTWASCFIQAAWRRLQKRKATRELSLKEGVYYMALPETEESANYEFSGNDKKVQNLGATVLASRFAANTRKVNHKLQDPVPQLFKPDEPDFSIDHEV 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02119 682 CDD CAP_ED 450 581 IPR000595 -
Pste4g02119 682 Gene3D - 55 375 - -
Pste4g02119 682 ProSiteProfiles cAMP/cGMP binding motif profile. 450 580 IPR000595 -
Pste4g02119 682 Gene3D Helix hairpin bin 378 441 - -
Pste4g02119 682 Pfam Ion transport protein 50 377 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pste4g02119 682 Pfam Cyclic nucleotide-binding domain 473 560 IPR000595 -
Pste4g02119 682 SMART cnmp_10 450 581 IPR000595 -
Pste4g02119 682 FunFam Cyclic nucleotide-gated ion channel 1 448 566 - -
Pste4g02119 682 SUPERFAMILY cAMP-binding domain-like 380 575 IPR018490 -
Pste4g02119 682 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 28 676 - -
Pste4g02119 682 SUPERFAMILY Voltage-gated potassium channels 42 372 - -
Pste4g02119 682 Gene3D Jelly Rolls 448 568 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02119 Pste-Chr4 15493352 15495834 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02119 10 681 Ion Channels AT5G14870 67.188 0.0 980