Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02112 ACTAAACGACGTCGCGCCATAACTAGAACAAAGGCAAGTGGCAGAGTAACGGAGTTGAGAAGTAACAGCGTCACGAGTAAGAAAGCGACCACAAACAGAACCAGTGAATGTGGGACACGTGTCCGGCCGTGCAGACTCGAAACGCACAATTTGGATGACAACCCACTTTCGAACATTCGCACGAATTTTTCTCTCTCTCTCTCTTCAATTCTACCCTTCCAGGTGGATGAATCATGTGTACCTGCTCTTCAAGATGAAGATATGGAAGTCGAGCATTTGCTTGCAGAACCTAGAAATGATCATACATCTATGGATGGTATATTACATTTTAATGAGCAGAATATAGGGAAATGCTATGATGCTGAAAATCTTTCCTGTGGATTTGAGTCTGGTTTAAAATCAAGTAGTGGTAGTTCGGATTCACGTACAACTTTGAATGGCAAGGATGAATTGGAACTGGAGGTCCTTGATGGATTGCTGGACGATGTGGAAATCAATGATCTTGAAGGAACTGATGATTATGAATTTGCTGACAATGTTGAGGAGGTACTAGGCTCTGGTCCTTTTGAAGGTTTACTCTTTCAAAACTCAAGTTCAGAAAGTCATTCTTCCGTATTAAGCGGAAGTAGCATTGTTAGTGGGGTATTAGAATCAACAAAAGTACCTATTGCACAATATGAGCGCAAAAATGATTCTCTAGATGAGACAGTAACCTTTGAGTCAAATGGTGCCTTCACAAACATTCCAAGTCAACCAGCAAAAGTAAATTGTAGGTACAACATTTCACTTGATATACAACATCTGCAAGAGTTGGATAACAATCGTCATTTAGCTGGTGGTATATTGACTTGTAAGAAGGAAAAAGGCCCTGTTGAAAAATGCCAACCTGATGCACTTAGAGAGAAAAGATTCCGAAAGCCTACTCAGAGGTATATTGAAGAGTTTTCAAATTCGAGGTCGAAGGAAAAAGCACCAACTATTGGTACAAAAACTAGACATTTAAGTAACTCATCATCTAATGTACTTCATTTAAGAATTAAAACATTAAAAAAGAGTCCAAGCGAGAAGTCTAGTAATGAAAATAGTGACATGATGCTTCCAGAGCTGCAAGTTCACAAAGAGCATCCAAAGAAAGAGAAACTTGAGTATGACAATGAACCATATCCCTCGGACTCTGAGGATGGATGTTCAATATCAAAAAGATCTAGAAGGAAAGATAGAAGAAAGCATCAGAAGATGTGGACTCTCCCCGAAGTATTGAAGTTGGTTGAAGGCATATCAGAATATGGAGTTGGTCGATGGACTGATATAAAGAGATTTCTGTTTTCTTCTTCAAGCTATCGAACTCCCATAGATCTCAGGGACAAGTGGCGAAACCTCCTGAGAGCCAGTTCTGTACAGAAAAATAAGAGAGAGGATGAGCAAAATGACGAGCTTGCCCTACGTCCCTTGCCATTTAATGTGGTACATCGTGTGAGAGAATTGGCTAAAATTCACCCATACCCAAGGCAACGTGGGTCAAAGAAATCGCGTGTAGTGCAAGCTGGCTCTTCTGTCATTGCTACAGATTCTTCTCCCGCTGGTCTTAACAAAAGAAATGTACGTAGGAAGTTTACTTAGAAGTCCAAATGTACAACAGTCCAGGAAAATCTATAGTCAAAAGAATCTTGCTGAAATTTAGATATCACATTTGCAAAATTTTATACTGTCAAGTAATTTCTCTTTGTATCCAAAAAGGCATAGAAATTTTCAATTGTAAACATGAGGAATCATTAGTTGTCCTACAATAGTTTGCAATGCATAATGCCTAACCGCTTCAAATTTAATGATTTTTTGGTCCAACTAATGTGATTAGAGCTGTGTTGTAAGATAACCGCCATGGTGGGTTTATGTCGTGACGAATGTTTTGTCAACTATCATAAATAATTTATGAAGAAATGCACTCCATAAGGCATAATGACATGCTTTTAC 1971 0.3896 TKRRRAITRTKASGRVTELRSNSVTSKKATTNRTSECGTRVRPCRLETHNLDDNPLSNIRTNFSLSLSSILPFQVDESCVPALQDEDMEVEHLLAEPRNDHTSMDGILHFNEQNIGKCYDAENLSCGFESGLKSSSGSSDSRTTLNGKDELELEVLDGLLDDVEINDLEGTDDYEFADNVEEVLGSGPFEGLLFQNSSSESHSSVLSGSSIVSGVLESTKVPIAQYERKNDSLDETVTFESNGAFTNIPSQPAKVNCRYNISLDIQHLQELDNNRHLAGGILTCKKEKGPVEKCQPDALREKRFRKPTQRYIEEFSNSRSKEKAPTIGTKTRHLSNSSSNVLHLRIKTLKKSPSEKSSNENSDMMLPELQVHKEHPKKEKLEYDNEPYPSDSEDGCSISKRSRRKDRRKHQKMWTLPEVLKLVEGISEYGVGRWTDIKRFLFSSSSYRTPIDLRDKWRNLLRASSVQKNKREDEQNDELALRPLPFNVVHRVRELAKIHPYPRQRGSKKSRVVQAGSSVIATDSSPAGLNKRNVRRKFT 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02112 539 CDD SANT_TRF 412 462 - -
Pste4g02112 539 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 74 513 - -
Pste4g02112 539 MobiDBLite consensus disorder prediction 315 410 - -
Pste4g02112 539 MobiDBLite consensus disorder prediction 1 32 - -
Pste4g02112 539 SUPERFAMILY Homeodomain-like 413 480 IPR009057 -
Pste4g02112 539 Pfam Myb-like DNA-binding domain 413 461 IPR001005 -
Pste4g02112 539 Gene3D - 399 512 - -
Pste4g02112 539 SMART sant 410 463 IPR001005 -
Pste4g02112 539 MobiDBLite consensus disorder prediction 367 387 - -
Pste4g02112 539 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 405 465 IPR017930 -
Pste4g02112 539 MobiDBLite consensus disorder prediction 329 345 - -
Pste4g02112 539 MobiDBLite consensus disorder prediction 14 32 - -
Pste4g02112 539 ProSiteProfiles Myb-like domain profile. 406 461 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02112 Pste-Chr4 15461353 15467539 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02112 410 470 Single Myb Histone (SMH) Gene Family AT1G17520 42.188 1.54e-06 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02112 4 15461353 15467539 Pste4g02112 4 15461353 15467539 ECH