Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02110 ATAAAGATTGGGAGGAAGCATTTGATTTTAAAGGAAGGAGATTTTAGAGATACAATATGTACTGCGGCTGAAATAAGGTATTACTTCCATGGTTTCTTGGACCAAGGGTTATCGTCTTCCAATTACGTAAAACCTAATAAGAATTGCAATTTAACCTCATGGGTTTCTGGTTGTGAACCTGGATGGAGTTGTAGTGCTGGAAAAAATGTTGACCTAAAAAAAGATGTAAAGGACATTCCTTTCAGAACCGACAAGTGTCAGCCTTGTTGTGAAGGGTTTTTTTGTCCTCAAGGATTGACTTGCATGATACCTTGCCCACTAGGTTCTTATTGTCCACTTGCAAAACTAAACAATGCGACTGGAATGTGTGATCCATATAGTTATCAGATACCTCAGGGAGAAACAAATCATACTTGTGGTAGTGCTGATATTTGGTCTGGTGTTGTGAACAATAGTGACATCTTTTGTTCTCCAGGATCATATTGCCCCACTACAACACGCAAAGTTTCTTGTGATAGTGGGATGGGTTCGACTCACCAAAATCCATGCTCCAAGTTGAGTAGCTGTAATCCAAACACATCAAACCAAAATATGCATGCTTATGGCGCTTTGCTTATTGTTGCATTGAGTACTCTCCTGATCTTCATTTATAATTGTTCTGATCAAGTTTTGGTTACTCGAGAAAGGAGAAAGGCTAAATCTAGGGAAGCTGCTGCTAGGCAAGTAAGAGAAACTGTACAAGCTCGAGAAAGGTGGAAAGTAGCAAGGGAAGTTGCTAAGAAAGGTAGGGCAGGATTCGGAGAGCAATTATCTCGAACCTTTTCTCGCAAAAAATCAGTAAAGCAACCAGATCCATTAAAGGTTTCTGGCCAAGCTAAACAAGGTACAGGTGATACATTTTTGCCAACAAATCCTCAAAATTCTTCAAGCATGCATGAGGAATCATCTACAGCTCCTAAAGGGAAAAATAAAGAACCTACCAACCTTACTAAAATGTTGAATTCCCTTGAAAATGACCCACATGGTAATGAAGGATTCAATCTACAAATTGGAGATAAAAATATTAAAAAACAAATGCTAAAGGGAAAAAATTTGCATACACAAAGCCAAATTTTAAGGTATGCTTATGGTCAGATTGAGAAGGAAAAAGCTCAACAAGAGAAAAACAAGAACTTGACTTTCTCGGGAGTTATTTCGATGGCTACCGAAGGTGAGGTTCGGACAAGGCCCGTGATTGAGGTAGCTTTTAAAGATTTAACTCTTACTTTGAAAGGTAAAAGAAAACATCTACTGAGATGTGTGAGTGGTAAGCTTATGCCGGGTCGAGTTTCTGCTGTGATGGGTCCCTCTGGAGCTGGCAAAACTACATTTCTTTCTGCTTTGGCAGGGAAAGCAAGAGGATGCACCATGACTGGATCAATTCTAATCAATGGAAAGTCTGAATCAATTCATTGTTATCAAAAAATTATTGGCTTTGTGCCACAAGATGATATTGTGCATGGGAACTTAACAGTAGAGGAAAATCTTCGTTTTAGTGCAAGATGCAGACTATCAGCGGATATGCCTAAACCAGATAAGGTTTTGATTGTTGAAAGAGTAATTGAGTCCTTAGGACTCCAGGCAATAAGGGATTCCCTTGTTGGGACAGTAGAGAAGCGAGGTATATCTGGAGGGCAACGAAAACGTGTAAATGTAGGGATGGAGATGGTTATGGAACCTTCATTATTAATCTTAGATGAGCCTACAACTGGCTTAGATAGTGCATCTTCCACTTTACTACTCAAAGCACTTCGTCGTGAAGCACTAGAAGGGGTAAATATCTGCATGGTACTTCACCAACCAAGCTATACTTTGTTTAGAATGTTTGATGATATAATCTTTCTAGCCAAAGGTGGTCTTACTGCATATCATGGTCCTGTTAAAAAAGTAGAAGAATATTTTGCTGGCATTGGAATCAATGTACCTGACCGTGTGAATCCTCCGGACCATTTCATTGACATTTTGGAAGGCTTGGTGAAACCAAGTGGAAGTGTGACCCATCAACAACTTCCTGTCAGATGGATGTTACATAATAGTTACCCAGTACCGCCAGATATGCTTCATTTTGCTGATCAAATTGCTGCCTCTTCCTCTTCTTCCCCCTCCCAAAATGCACATGACGTAACAAAGGGCACAGATGAAGCTGTTTATCAATCCTTTGCCGGGGAATTTTGGGAGGATATGAAGAGTAATGTTCAGATGCGACGAGATCATATAGAGGCAACTTTCTTAAAGACTAAGGACTTGTCTAATCGAAGAACTCCGGGTGTAGCTCGACAATATAGATATTACCTTGGGCGCATTTGTAAGCAGACATTACGAGAAGGAAAATCACAAGCAGTTGACTACCTTCTTCTATTAGTTGCCGGTGCTATATTAGGAACTCTTACTAAAGTAAATGATGAAACGTTTGGGTCCCTTGGATATACTTATACAGTTATCGCAATTGCAGCTCTTAGGTCATTTTCTCTGGATAAATTACAATATTGGAGGGAGAGTGCATCTGGGATTAGCAATTTGGCTCATTTTTTAGCCAAAGATTCAATTGATCTCTTCAACACAATCATCAAACCTGTAGTTTATTTGTCCATGTTCTATTTTTTTAGCAATCCAAGGTCAAGCTTTGCAAGTAATTATGTGGTTTTGCTGTGCCTTGTGTATTGTGTGTCTGGCATGGCTTATGCAATAGCAATTTATTTTGAGCCTGCTCCAGCTCAACTGTGGTCAGTGCTTCTCCCAGTTGTTATGACTCTTATTGCAAACCAGAAAAGAGACACTCTCTTTATGAAGATCCTCGTAAAGTTGTGCTACCCAAATTGGGCTTTGGAGGCCTTTATCATTGCAAATGCTGAAAGGTACACTGGAGTTTGGCTGATAACTCGATGTAGTTCACTAATGAATAACGGTTATAATGTCAGCGATTGGCCTCTTTGTCTTATTGCCCTCATTTTTTACGGTATAATTGCTCGAGTTGTGGCCTTCTTTTGTTTGTTGATCACTCAAAAGAAG 3048 0.3967 IKIGRKHLILKEGDFRDTICTAAEIRYYFHGFLDQGLSSSNYVKPNKNCNLTSWVSGCEPGWSCSAGKNVDLKKDVKDIPFRTDKCQPCCEGFFCPQGLTCMIPCPLGSYCPLAKLNNATGMCDPYSYQIPQGETNHTCGSADIWSGVVNNSDIFCSPGSYCPTTTRKVSCDSGMGSTHQNPCSKLSSCNPNTSNQNMHAYGALLIVALSTLLIFIYNCSDQVLVTRERRKAKSREAAARQVRETVQARERWKVAREVAKKGRAGFGEQLSRTFSRKKSVKQPDPLKVSGQAKQGTGDTFLPTNPQNSSSMHEESSTAPKGKNKEPTNLTKMLNSLENDPHGNEGFNLQIGDKNIKKQMLKGKNLHTQSQILRYAYGQIEKEKAQQEKNKNLTFSGVISMATEGEVRTRPVIEVAFKDLTLTLKGKRKHLLRCVSGKLMPGRVSAVMGPSGAGKTTFLSALAGKARGCTMTGSILINGKSESIHCYQKIIGFVPQDDIVHGNLTVEENLRFSARCRLSADMPKPDKVLIVERVIESLGLQAIRDSLVGTVEKRGISGGQRKRVNVGMEMVMEPSLLILDEPTTGLDSASSTLLLKALRREALEGVNICMVLHQPSYTLFRMFDDIIFLAKGGLTAYHGPVKKVEEYFAGIGINVPDRVNPPDHFIDILEGLVKPSGSVTHQQLPVRWMLHNSYPVPPDMLHFADQIAASSSSSPSQNAHDVTKGTDEAVYQSFAGEFWEDMKSNVQMRRDHIEATFLKTKDLSNRRTPGVARQYRYYLGRICKQTLREGKSQAVDYLLLLVAGAILGTLTKVNDETFGSLGYTYTVIAIAALRSFSLDKLQYWRESASGISNLAHFLAKDSIDLFNTIIKPVVYLSMFYFFSNPRSSFASNYVVLLCLVYCVSGMAYAIAIYFEPAPAQLWSVLLPVVMTLIANQKRDTLFMKILVKLCYPNWALEAFIIANAERYTGVWLITRCSSLMNNGYNVSDWPLCLIALIFYGIIARVVAFFCLLITQKK 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02110 1016 CDD ABCG_EPDR 412 638 - -
Pste4g02110 1016 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 414 637 IPR027417 -
Pste4g02110 1016 MobiDBLite consensus disorder prediction 292 328 - -
Pste4g02110 1016 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 414 655 IPR003439 GO:0005524
Pste4g02110 1016 MobiDBLite consensus disorder prediction 269 328 - -
Pste4g02110 1016 FunFam ABC transporter G family member 24 408 650 - -
Pste4g02110 1016 Pfam ABC transporter 433 582 IPR003439 GO:0005524
Pste4g02110 1016 ProSitePatterns ABC transporters family signature. 555 569 IPR017871 GO:0005524|GO:0016887
Pste4g02110 1016 Gene3D - 404 650 IPR027417 -
Pste4g02110 1016 SMART AAA_5 440 632 IPR003593 GO:0016887
Pste4g02110 1016 Pfam ABC-2 type transporter 612 1016 IPR043926 GO:0140359
Pste4g02110 1016 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 379 1003 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02110 Pste-Chr4 15440274 15453572 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02110 441 634 Calmodulin-binding Proteins AT2G36910 28.218 5.41e-10 62.0