Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02109 ACAACAACAACAACAACAACGTTTTCTAGCTGTTTTTGTTTCTTTTCTTTTCTTGAACTCTTTGTTACTTGGTCTCCGGAAAACACGTTCACACTACACACAGTTAAGTTTGGATCTTAAATAATACTATACAGATATCAATTGAAGTTGTTTGCTTGGTTTGGCTTCCAATTTGGTTGGTGAGTTGACCCTGCAAGCCGTGCAGGGACCTCTATTTGGAGTTTTCCTGTTCGTTCTCCTCTTTTTGGAAGCAATGGCTTAAGTGGGTCTTCTCTTCTCAGAACTTGGGTACCACAAACAAAAGATAAAAAGGGAATTTGTGGTTTTGTTGAGCTCAGAGAAGCTGAAGCTTTTCGGGATCCAACTATCTGTTTGAACTTGAGTCAGGTTGCAATGAAGTGTTTTCCATTCTACTTTGGAGAGAAGGATGGTCCCAAGAGCTTGCAATCAATATCGATCCGGTCCAACAGTTCTACTTATGTTGAGGCTGAGATGAGAAGATCTGGTTCTGAATTAAACTCTATGGATGCCTCAGACACCAGCACAGACTCCCTCAAGAGAAGTGCTTTCCCCAGTTTGTCCCAAAGATCTAGCAACCTCAGAGTATTTACTGTATCTGAACTGAAAACAGCCACAAAGAGTTTTAGTCGCTCTGTCATGCTGGGAGAAGGTGGGTTTGGGTGTGTCTACAAAGGGTTCATCAAGAGTGAAGATGATCCTTCCACAAAAATTGAAGTTGCGGGGCATAAGGAATGGGTAACAGAAGTGAATGTTCTGGGTATTGTGGAGCATCCCAATCTGGTGAAACTAGTGGGATACTGTGCTGATGATGATGAAAGAGGAATCCAGAGGCTTCTGATTTACGAATATATGCCCAACAGTAGTGTTGAACACCATTTATCACCACGATCAGAAACTCCTTTCCCATGGAGTAGGAGGTTAAAAATAGCCCAAGATGCGGCTCGTGGTTTAACATACCTGCATGAGGAAATGGACTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAATATCCTTTTGGACGAGCAGTGGAATGCAAAGCTGTCAGACTTTGGGCTAGCAAGATTGGGACCATCAGATGGGTTAACTCACGTCTCAACAGCGGTTGTAGGAACAATGGGTTATGCAGCTCCTGAATATGTTCAAACTGGACGCCTCACATCAAAGAGTGATGTATGGAGCTATGGTGTCTTCCTTTATGAACTCATCACTGGTAGGCGTCCTATTGATCGAAATCGCCCCAAGGGTGAGCAGAAGCTGTTGGAATGGGTAAGGCCATACCTTTCAGATGGGAGGAAATTTCAATTAATATTGGATCCCAGACTTGAGAGGAAACACCTCTTAAAGTCAGCACAAAAACTTGCTATGATAGCCAACAGATGCCTGGTCAGAAACCCAAAGAATCGGCCAAAGATGAGTGACGTGTTACAAATGGTGACTCAGGTTTTGGAGTCTTCAGTGAGTAATAATCCACAGCCACCCTTGAAGAGTGTTGTAGCCTCAGAAGAAGATTCTCATGACACTGAAATAAAGAGCGAGAAAGTAACCATGGATAAAAAACCAGACTGTAATTGGTTAAGGATGTGGAGGCCAAAGCTTTTTAGAGCATGTAGATTATTGTAGCTTTAAACTGGTCAAGACTGTGAATTGGAGGTAACGTTTCTTTATGACAAGAATCATCTATTATTGCCACACTTGGACACAGCAAAGACCCATACCTGGACACCTCACAGAGCAGCTCATGTTAATGCTGATGTTGTCACACAAAAAAATGTCAAGCCTCTTCATCTCCCAGAACGAAGTGTATAAACTGGTTGTGCTATTTACGTGGCGCTTCTTGCTTAATGCTTCTCAAGCTATCTAATAAAAATTTTACGGATGCAAGTAAGAGGAATGAATTGTGTATTTCAAGATAGAGGTTCGTTTTCTATGATATGCTAGCTATGTTGATAAGCTGGATGAAACTAGCTGCTCTACATCTTACAGGAGCCACAATACAGAAAAGTGAAAATTAATCATTTCAATGGATGTATAATACTTCAGTTTGTAAATTCTATATCTTTTTATATGCACATTTTTTTTTTATAAATATGCATATTGCAA 2124 0.4077 MKCFPFYFGEKDGPKSLQSISIRSNSSTYVEAEMRRSGSELNSMDASDTSTDSLKRSAFPSLSQRSSNLRVFTVSELKTATKSFSRSVMLGEGGFGCVYKGFIKSEDDPSTKIEVAGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNSSVEHHLSPRSETPFPWSRRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYVQTGRLTSKSDVWSYGVFLYELITGRRPIDRNRPKGEQKLLEWVRPYLSDGRKFQLILDPRLERKHLLKSAQKLAMIANRCLVRNPKNRPKMSDVLQMVTQVLESSVSNNPQPPLKSVVASEEDSHDTEIKSEKVTMDKKPDCNWLRMWRPKLFRACRLL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02109 416 CDD STKc_IRAK 90 357 - -
Pste4g02109 416 Gene3D Phosphorylase Kinase; domain 1 62 159 - -
Pste4g02109 416 PANTHER OS01G0588500 PROTEIN-RELATED 49 357 - -
Pste4g02109 416 MobiDBLite consensus disorder prediction 362 385 - -
Pste4g02109 416 FunFam Serine/threonine-protein kinase PCRK2 160 369 - -
Pste4g02109 416 Gene3D Transferase(Phosphotransferase) domain 1 160 376 - -
Pste4g02109 416 ProSiteProfiles Protein kinase domain profile. 84 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g02109 416 SUPERFAMILY Protein kinase-like (PK-like) 60 355 IPR011009 -
Pste4g02109 416 Pfam Protein kinase domain 86 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02109 Pste-Chr4 15424240 15428229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02109 1 392 Glycoside Hydrolase AT3G07070 40.194 2.88e-86 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pste4g02109 Pkinase 1.9e-44 CL0016